RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 TIMM21Q9BVV7 248 aa16.62■□□□□ 0.25
PERM1-203ENST00000479361 UBE2D4Q9Y2X8 147 aa16.62■□□□□ 0.25
PERM1-203ENST00000479361 LRCOL1A6NCL2 159 aa16.61■□□□□ 0.25
PERM1-203ENST00000479361 ZNF664Q8N3J9 261 aa16.6■□□□□ 0.25
PERM1-203ENST00000479361 CDC42SE2Q9NRR3 84 aa16.6■□□□□ 0.25
PERM1-203ENST00000479361 IFI27P40305 119 aaPredicted RBP16.59■□□□□ 0.25
PERM1-203ENST00000479361 ORMDL2Q53FV1 153 aa16.59■□□□□ 0.25
PERM1-203ENST00000479361 SPATA12Q7Z6I5 190 aa16.59■□□□□ 0.25
PERM1-203ENST00000479361 MAPKAPK5-AS1Q8N8E1 139 aa16.59■□□□□ 0.25
PERM1-203ENST00000479361 PKD1P98161 4303 aa16.59■□□□□ 0.25
PERM1-203ENST00000479361 IGLV10-54A0A075B6I4 117 aa16.58■□□□□ 0.24
PERM1-203ENST00000479361 IGKV3OR2-268A0A0C4DH90 116 aa16.58■□□□□ 0.24
PERM1-203ENST00000479361 RPL39P62891 51 aaKnown RBP16.58■□□□□ 0.24
PERM1-203ENST00000479361 PRSS3P2Q8NHM4 247 aa16.58■□□□□ 0.24
PERM1-203ENST00000479361 SPANXA1Q9NS26 97 aa16.58■□□□□ 0.24
PERM1-203ENST00000479361 BAALCQ8WXS3 180 aa16.57■□□□□ 0.24
PERM1-203ENST00000479361 G0S2P27469 103 aa16.56■□□□□ 0.24
PERM1-203ENST00000479361 PGPEP1Q9NXJ5 209 aa16.56■□□□□ 0.24
PERM1-203ENST00000479361 LECT2O14960 151 aa16.54■□□□□ 0.24
PERM1-203ENST00000479361 KRTAP26-1Q6PEX3 210 aa16.54■□□□□ 0.24
PERM1-203ENST00000479361 Q8N814 137 aa16.54■□□□□ 0.24
PERM1-203ENST00000479361 CYSLTR1Q9Y271 337 aa16.54■□□□□ 0.24
PERM1-203ENST00000479361 KRTAP10-2P60368 255 aa16.53■□□□□ 0.24
PERM1-203ENST00000479361 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
PERM1-203ENST00000479361 Q6ZUT4 128 aa16.52■□□□□ 0.24
PERM1-203ENST00000479361 PYGO1Q9Y3Y4 419 aa16.52■□□□□ 0.24
PERM1-203ENST00000479361 LINC00959A0A1B0GUT2 108 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 C16orf90A8MZG2 172 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 MRPS36P82909 103 aaKnown RBP16.51■□□□□ 0.23
PERM1-203ENST00000479361 WFDC2Q14508 124 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 SS18Q15532 418 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 C14orf177Q52M58 125 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 C2orf66Q6UXQ4 117 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 FA2HQ7L5A8 372 aa16.51■□□□□ 0.23
PERM1-203ENST00000479361 NTN5Q8WTR8 489 aaPredicted RBP16.51■□□□□ 0.23
PERM1-203ENST00000479361 CHCHD10Q8WYQ3 142 aaPredicted RBP16.51■□□□□ 0.23
PERM1-203ENST00000479361 PKHD1P08F94 4074 aa16.5■□□□□ 0.23
PERM1-203ENST00000479361 LINC01546A6NGU7 62 aa16.49■□□□□ 0.23
PERM1-203ENST00000479361 CCL25O15444 150 aa16.49■□□□□ 0.23
PERM1-203ENST00000479361 DNAH11Q96DT5 4516 aa16.49■□□□□ 0.23
PERM1-203ENST00000479361 GAGE12HA6NDE8 117 aa16.48■□□□□ 0.23
PERM1-203ENST00000479361 RNASE13Q5GAN3 156 aaKnown RBP16.48■□□□□ 0.23
PERM1-203ENST00000479361 C18orf32Q8TCD1 76 aa16.48■□□□□ 0.23
PERM1-203ENST00000479361 C1orf196B1AJZ1 125 aa16.47■□□□□ 0.23
PERM1-203ENST00000479361 USP17L23D6RBM5 183 aa16.47■□□□□ 0.23
PERM1-203ENST00000479361 LINC01549A6NIU2 74 aa16.46■□□□□ 0.23
PERM1-203ENST00000479361 XCL1P47992 114 aa16.46■□□□□ 0.23
PERM1-203ENST00000479361 TRAV13-1A0A0B4J241 112 aa16.45■□□□□ 0.22
PERM1-203ENST00000479361 NPSP0C0P6 89 aa16.45■□□□□ 0.22
PERM1-203ENST00000479361 OPRPNQ99935 248 aaPredicted RBP16.45■□□□□ 0.22
PERM1-203ENST00000479361 AP5S1Q9NUS5 200 aa16.45■□□□□ 0.22
PERM1-203ENST00000479361 IGLV4-3A0A075B6K6 122 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 IGLV5-52A0A0A0MRZ9 124 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 COLCA2A8K830 154 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 RAB5BP61020 215 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 Q6ZN92 141 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 FAM104AQ969W3 186 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 TOMM6Q96B49 74 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 TMEM141Q96I45 108 aa16.44■□□□□ 0.22
PERM1-203ENST00000479361 LINC00614P0C842 121 aa16.43■□□□□ 0.22
PERM1-203ENST00000479361 CD164L2Q6UWJ8 174 aa16.43■□□□□ 0.22
PERM1-203ENST00000479361 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.42■□□□□ 0.22
PERM1-203ENST00000479361 IFITM10A6NMD0 228 aa16.42■□□□□ 0.22
PERM1-203ENST00000479361 FUSP35637 526 aaKnown RBP eCLIP16.42■□□□□ 0.22
PERM1-203ENST00000479361 FOXI1Q12951 378 aa16.42■□□□□ 0.22
PERM1-203ENST00000479361 CFAP161Q6P656 301 aa16.42■□□□□ 0.22
PERM1-203ENST00000479361 IGIPA6NJ69 53 aa16.41■□□□□ 0.22
PERM1-203ENST00000479361 SCO1O75880 301 aa16.41■□□□□ 0.22
PERM1-203ENST00000479361 TRGC2P03986 189 aa16.41■□□□□ 0.22
PERM1-203ENST00000479361 PAPPA-AS1Q5QFB9 102 aa16.41■□□□□ 0.22
PERM1-203ENST00000479361 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
PERM1-203ENST00000479361 TIMM17AQ99595 171 aa16.4■□□□□ 0.22
PERM1-203ENST00000479361 ERASQ7Z444 233 aa16.39■□□□□ 0.21
PERM1-203ENST00000479361 SCGB3A1Q96QR1 104 aa16.39■□□□□ 0.21
PERM1-203ENST00000479361 C2orf88Q9BSF0 95 aa16.39■□□□□ 0.21
PERM1-203ENST00000479361 VCX2Q9H322 139 aa16.39■□□□□ 0.21
PERM1-203ENST00000479361 BIRC6Q9NR09 4857 aa16.39■□□□□ 0.21
PERM1-203ENST00000479361 GCSHP23434 173 aa16.38■□□□□ 0.21
PERM1-203ENST00000479361 PRSS1P07477 247 aa16.37■□□□□ 0.21
PERM1-203ENST00000479361 S100A1P23297 94 aa16.37■□□□□ 0.21
PERM1-203ENST00000479361 URB1-AS1Q96HZ7 61 aa16.37■□□□□ 0.21
PERM1-203ENST00000479361 hDV102S1A0JD36 115 aa16.36■□□□□ 0.21
PERM1-203ENST00000479361 COX7A2LO14548 114 aa16.35■□□□□ 0.21
PERM1-203ENST00000479361 AMELXQ99217 191 aa16.35■□□□□ 0.21
PERM1-203ENST00000479361 C15orf56Q8N910 161 aa16.34■□□□□ 0.21
PERM1-203ENST00000479361 CHCHD1Q96BP2 118 aaKnown RBP16.34■□□□□ 0.21
PERM1-203ENST00000479361 IGHV1-58A0A0C4DH39 117 aa16.33■□□□□ 0.2
PERM1-203ENST00000479361 MALP21145 153 aa16.33■□□□□ 0.2
PERM1-203ENST00000479361 DYNC1H1Q14204 4646 aaKnown RBP16.32■□□□□ 0.2
PERM1-203ENST00000479361 HBDP02042 147 aa16.32■□□□□ 0.2
PERM1-203ENST00000479361 LINC00173Q6ZV60 143 aa16.32■□□□□ 0.2
PERM1-203ENST00000479361 BAGE3Q86Y29 109 aa16.32■□□□□ 0.2
PERM1-203ENST00000479361 ATP6V1G1O75348 118 aa16.31■□□□□ 0.2
PERM1-203ENST00000479361 UBE2D1P51668 147 aa16.31■□□□□ 0.2
PERM1-203ENST00000479361 GVQW2A0A096LPI5 108 aaPredicted RBP16.3■□□□□ 0.2
PERM1-203ENST00000479361 A0A096LNJ9 63 aa16.29■□□□□ 0.2
PERM1-203ENST00000479361 IGHV3OR16-9A0A0B4J2B5 98 aa16.29■□□□□ 0.2
PERM1-203ENST00000479361 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.29■□□□□ 0.2
PERM1-203ENST00000479361 KRTAP10-1P60331 282 aa16.29■□□□□ 0.2
PERM1-203ENST00000479361 LINC00242Q5T6M2 205 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms