RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CFC1BP0CG36 223 aa19.84■□□□□ 0.77
CHKB-208ENST00000479003 CFC1P0CG37 223 aa19.84■□□□□ 0.77
CHKB-208ENST00000479003 CKS1BP61024 79 aa19.83■□□□□ 0.77
CHKB-208ENST00000479003 CEMP1Q6PRD7 247 aaPredicted RBP19.83■□□□□ 0.77
CHKB-208ENST00000479003 SPANXA1Q9NS26 97 aa19.83■□□□□ 0.77
CHKB-208ENST00000479003 FBN1P35555 2871 aaKnown RBP19.83■□□□□ 0.76
CHKB-208ENST00000479003 IGHV3-64A0A075B6Q5 118 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 UBE2D3P61077 147 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 UBE2D2P62837 147 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 IGLV1-51P01701 117 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 SPATA3Q8NHX4 192 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 UBE2D4Q9Y2X8 147 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 TRRAPQ9Y4A5 3859 aa19.82■□□□□ 0.76
CHKB-208ENST00000479003 XCL2Q9UBD3 114 aa19.81■□□□□ 0.76
CHKB-208ENST00000479003 STHQ8IWL8 128 aa19.8■□□□□ 0.76
CHKB-208ENST00000479003 ETDBQ3ZM63 59 aa19.79■□□□□ 0.76
CHKB-208ENST00000479003 PRIMA1Q86XR5 153 aa19.79■□□□□ 0.76
CHKB-208ENST00000479003 C1orf158Q8N1D5 194 aa19.79■□□□□ 0.76
CHKB-208ENST00000479003 IGHV3-30-3P0DP02 117 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 C10orf126Q8N4M7 172 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 TIMM21Q9BVV7 248 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 LOC107984156A0A0G2JMH3 177 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 LYRM7Q5U5X0 104 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 ARL17AQ8IVW1 177 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 IL17DQ8TAD2 202 aa19.78■□□□□ 0.76
CHKB-208ENST00000479003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.76■□□□□ 0.75
CHKB-208ENST00000479003 TINCRA0A1B0GVN0 87 aa19.76■□□□□ 0.75
CHKB-208ENST00000479003 IGKV2-29A2NJV5 120 aaPredicted RBP19.76■□□□□ 0.75
CHKB-208ENST00000479003 RNASE13Q5GAN3 156 aaKnown RBP19.76■□□□□ 0.75
CHKB-208ENST00000479003 SH2D6Q7Z4S9 175 aa19.76■□□□□ 0.75
CHKB-208ENST00000479003 PRO1854Q9UHT4 67 aa19.76■□□□□ 0.75
CHKB-208ENST00000479003 IGHV3-38A0A0C4DH36 116 aa19.75■□□□□ 0.75
CHKB-208ENST00000479003 A0A0J9YXY3 114 aa19.75■□□□□ 0.75
CHKB-208ENST00000479003 NOTCH3Q9UM47 2321 aa19.75■□□□□ 0.75
CHKB-208ENST00000479003 IGHV1-58A0A0C4DH39 117 aa19.74■□□□□ 0.75
CHKB-208ENST00000479003 A4D1N5 150 aa19.74■□□□□ 0.75
CHKB-208ENST00000479003 PSMB2P49721 201 aa19.74■□□□□ 0.75
CHKB-208ENST00000479003 SFTA2Q6UW10 78 aa19.74■□□□□ 0.75
CHKB-208ENST00000479003 Q6ZUT4 128 aa19.73■□□□□ 0.75
CHKB-208ENST00000479003 C1QTNF4Q9BXJ3 329 aa19.73■□□□□ 0.75
CHKB-208ENST00000479003 MUSTN1Q8IVN3 82 aa19.72■□□□□ 0.75
CHKB-208ENST00000479003 IGHV3OR16-12A0A075B7B8 117 aa19.72■□□□□ 0.75
CHKB-208ENST00000479003 TRAV8-3A0A0A6YYJ7 113 aa19.72■□□□□ 0.75
CHKB-208ENST00000479003 FOXI1Q12951 378 aa19.71■□□□□ 0.75
CHKB-208ENST00000479003 A0A0B4J2C4 111 aa19.7■□□□□ 0.74
CHKB-208ENST00000479003 EIF4EBP3O60516 100 aaPredicted RBP19.7■□□□□ 0.74
CHKB-208ENST00000479003 SMCPP49901 116 aaPredicted RBP19.7■□□□□ 0.74
CHKB-208ENST00000479003 TMEM263Q8WUH6 116 aaKnown RBP19.7■□□□□ 0.74
CHKB-208ENST00000479003 VSIG2Q96IQ7 327 aa19.69■□□□□ 0.74
CHKB-208ENST00000479003 TRBV20-1A0A075B6N2 111 aa19.69■□□□□ 0.74
CHKB-208ENST00000479003 TRGV1A0A0A0MS02 117 aa19.69■□□□□ 0.74
CHKB-208ENST00000479003 LITAFQ99732 161 aa19.69■□□□□ 0.74
CHKB-208ENST00000479003 WFDC10AQ9H1F0 79 aa19.68■□□□□ 0.74
CHKB-208ENST00000479003 TCL1BO95988 128 aa19.67■□□□□ 0.74
CHKB-208ENST00000479003 GEMIN7Q9H840 131 aaKnown RBP19.67■□□□□ 0.74
CHKB-208ENST00000479003 STAB1Q9NY15 2570 aa19.67■□□□□ 0.74
CHKB-208ENST00000479003 IGHV3-33P01772 117 aa19.67■□□□□ 0.74
CHKB-208ENST00000479003 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.66■□□□□ 0.74
CHKB-208ENST00000479003 NDUFA12Q9UI09 145 aa19.66■□□□□ 0.74
CHKB-208ENST00000479003 C19orf73Q9NVV2 129 aa19.66■□□□□ 0.74
CHKB-208ENST00000479003 SPINK8P0C7L1 97 aa19.65■□□□□ 0.74
CHKB-208ENST00000479003 CMC4P56277 68 aaPredicted RBP19.65■□□□□ 0.74
CHKB-208ENST00000479003 TIRAPP58753 221 aa19.64■□□□□ 0.73
CHKB-208ENST00000479003 TRBV10-1A0A0K0K1A3 114 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 SPANXDQ9BXN6 97 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 SPANXCQ9NY87 97 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 IGLV5-45A0A087WSX0 123 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 C9orf66Q5T8R8 295 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 Q6ZTI0 123 aa19.63■□□□□ 0.73
CHKB-208ENST00000479003 TRAV26-1A0A087WT03 109 aa19.62■□□□□ 0.73
CHKB-208ENST00000479003 K7EQD1 137 aa19.62■□□□□ 0.73
CHKB-208ENST00000479003 INSL3P51460 131 aa19.62■□□□□ 0.73
CHKB-208ENST00000479003 ERG28Q9UKR5 140 aa19.62■□□□□ 0.73
CHKB-208ENST00000479003 TRAV4A0A0B4J268 109 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 SCGB1C2P0DMR2 95 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 ZFAND6Q6FIF0 208 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 DGAT2L7PQ6IED9 249 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 CDIP1Q9H305 208 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 RPL36AP83881 106 aaKnown RBP19.61■□□□□ 0.73
CHKB-208ENST00000479003 RPL36ALQ969Q0 106 aaKnown RBP19.61■□□□□ 0.73
CHKB-208ENST00000479003 FAM110AQ9BQ89 295 aa19.61■□□□□ 0.73
CHKB-208ENST00000479003 SBSPONQ8IVN8 264 aa19.6■□□□□ 0.73
CHKB-208ENST00000479003 A8MZ25 164 aa19.6■□□□□ 0.73
CHKB-208ENST00000479003 GIG44P09565 113 aaPredicted RBP19.6■□□□□ 0.73
CHKB-208ENST00000479003 C3orf56Q8N813 242 aa19.6■□□□□ 0.73
CHKB-208ENST00000479003 PPDPFLQ8WWR9 84 aa19.6■□□□□ 0.73
CHKB-208ENST00000479003 CDKN2A-AS1Q9UH64 79 aa19.6■□□□□ 0.73
CHKB-208ENST00000479003 ADAMTSL4-AS1Q5T5F5 129 aa19.59■□□□□ 0.73
CHKB-208ENST00000479003 COL6A5A8TX70 2615 aa19.58■□□□□ 0.73
CHKB-208ENST00000479003 DAZ2Q13117 558 aaKnown RBP19.58■□□□□ 0.72
CHKB-208ENST00000479003 DAZ4Q86SG3 579 aaKnown RBP19.58■□□□□ 0.72
CHKB-208ENST00000479003 DAZ3Q9NR90 486 aaKnown RBP19.58■□□□□ 0.72
CHKB-208ENST00000479003 WFDC9Q8NEX5 89 aa19.57■□□□□ 0.72
CHKB-208ENST00000479003 MIAQ16674 131 aa19.57■□□□□ 0.72
CHKB-208ENST00000479003 CSDC2Q9Y534 153 aaKnown RBP19.57■□□□□ 0.72
CHKB-208ENST00000479003 FAM19A3Q7Z5A8 133 aa19.56■□□□□ 0.72
CHKB-208ENST00000479003 LINC00694P0DN24 101 aa19.55■□□□□ 0.72
CHKB-208ENST00000479003 NTM-AS1Q6ZSK4 140 aa19.55■□□□□ 0.72
CHKB-208ENST00000479003 TIMM17BO60830 172 aa19.55■□□□□ 0.72
CHKB-208ENST00000479003 TEN1Q86WV5 123 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms