RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 ZNF876PQ49A33 203 aa4.36□□□□□ -1.71
TRA2B-211ENST00000477939 DCANP1Q8TF63 244 aa4.36□□□□□ -1.71
TRA2B-211ENST00000477939 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
TRA2B-211ENST00000477939 TRBV10-3A0A0K0K1G6 114 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 LINC01548A6NM66 108 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 CCL24O00175 119 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 CFC1P0CG37 223 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 S100A4P26447 101 aaKnown RBP4.35□□□□□ -1.71
TRA2B-211ENST00000477939 XCL1P47992 114 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 PLGLAQ15195 96 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 DEFB136Q30KP8 78 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 FAM53AQ6NSI3 398 aaPredicted RBP4.35□□□□□ -1.71
TRA2B-211ENST00000477939 LINC00596Q86U02 117 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 Q8N6K4 173 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 KLHL30-AS1Q8NEE0 82 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 ARHGAP5-AS1Q96IT6 56 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 B9D2Q9BPU9 175 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 NABP2Q9BQ15 211 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
TRA2B-211ENST00000477939 SACSQ9NZJ4 4579 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 A0A0A6YYD4 124 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 IGHV3-72A0A0B4J1Y9 119 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 IGHV1-3A0A0C4DH29 117 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 FRMD6-AS1P0C7T7 363 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 UBE2AP49459 152 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 FHL2Q14192 279 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 PIK3CD-AS1Q5SR53 167 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 UNQ9165/PRO28630Q6UXU0 137 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 Q6ZRM9 215 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 Q8N9W7 124 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 WWC2-AS2Q96NR7 200 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
TRA2B-211ENST00000477939 RPP21Q9H633 154 aaKnown RBP4.34□□□□□ -1.71
TRA2B-211ENST00000477939 RYR2Q92736 4967 aa4.34□□□□□ -1.72
TRA2B-211ENST00000477939 SORL1Q92673 2214 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 H7BZZ5 65 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 ARL14EPLP0DKL9 152 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 MP68P56378 58 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
TRA2B-211ENST00000477939 FXYD3Q14802 87 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 Q1T7F1 81 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 ESRGQ1W209 222 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
TRA2B-211ENST00000477939 GDF5OSQ5U4N7 250 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 CYYR1Q96J86 154 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
TRA2B-211ENST00000477939 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
TRA2B-211ENST00000477939 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
TRA2B-211ENST00000477939 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 IGHV3-43A0A0B4J1X8 118 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 TMEM30CPA0ZSE6 113 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 C12orf77C9JDV5 145 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 M0R381 172 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 LST1O00453 97 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 PRSS1P07477 247 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 IGHV3-43DP0DP04 118 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF137PP52743 207 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 SS18Q15532 418 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 PRR25Q96S07 402 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 U3KQK5 164 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
TRA2B-211ENST00000477939 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 A8MUN3 132 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 IGLV2-8P01709 118 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 MED14OSP0DP75 135 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 FXYD4P59646 89 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 EIF4EBP1Q13541 118 aaPredicted RBP4.31□□□□□ -1.72
TRA2B-211ENST00000477939 RHOHQ15669 191 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 LYSTQ99698 3801 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF355PQ9NSJ1 428 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 ZNF580Q9UK33 172 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
TRA2B-211ENST00000477939 LOC100131303A0A0U1RQF7 123 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 A0A1B0GUT8 65 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 G3V318 75 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 H0Y9J4 135 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 COX7A2LO14548 114 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 ATP6V0E1O15342 81 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 IGHV3-33P01772 117 aa4.3□□□□□ -1.72
TRA2B-211ENST00000477939 FUSP35637 526 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRA2B-211ENST00000477939 NDPQ00604 133 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms