RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 R4GMQ9 66 aa-0.52□□□□□ -2.49
TMF1-202ENST00000477872 VPS13DQ5THJ4 4388 aa-0.52□□□□□ -2.49
TMF1-202ENST00000477872 DNAH3Q8TD57 4116 aa-0.52□□□□□ -2.49
TMF1-202ENST00000477872 RIMS1Q86UR5 1692 aaKnown RBP-0.53□□□□□ -2.49
TMF1-202ENST00000477872 RAPGEF6Q8TEU7 1601 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 REV3LO60673 3130 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 GAPVD1Q14C86 1478 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 HIVEP1P15822 2718 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 NDUFB6O95139 128 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 SIX6O95475 246 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 PPP1R17O96001 155 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 IL5P05113 134 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 LINC00694P0DN24 101 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 S100A5P33763 92 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 RBM3P98179 157 aaKnown RBP-0.53□□□□□ -2.49
TMF1-202ENST00000477872 HIST1H1AQ02539 215 aaPredicted RBP-0.53□□□□□ -2.49
TMF1-202ENST00000477872 SCIMPQ6UWF3 145 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 CTAGE3PQ8IX95 158 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 AIF1LQ9BQI0 150 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 LENEPQ9Y5L5 61 aa-0.53□□□□□ -2.49
TMF1-202ENST00000477872 TULP4Q9NRJ4 1543 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 ZNF518AQ6AHZ1 1483 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 TACC2O95359 2948 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 CEP152O94986 1710 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 GNG14A0A1W2PPG7 69 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 SPINK4O60575 86 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 MT4P47944 62 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 RRAS2P62070 204 aaPredicted RBP-0.54□□□□□ -2.5
TMF1-202ENST00000477872 COX17Q14061 63 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 S100A7L2Q5SY68 101 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 Q6JHZ5 121 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 SPTSSAQ969W0 71 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 LYSTQ99698 3801 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 PSMG3Q9BT73 122 aaPredicted RBP-0.54□□□□□ -2.5
TMF1-202ENST00000477872 KIAA0556O60303 1618 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 MUC17Q685J3 4493 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 ZZEF1O43149 2961 aa-0.54□□□□□ -2.5
TMF1-202ENST00000477872 FHAD1B1AJZ9 1412 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 MYOM3Q5VTT5 1437 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 PPIP5K1Q6PFW1 1433 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 LAMA1P25391 3075 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 MYOM1P52179 1685 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 SHROOM2Q13796 1616 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 PKHD1L1Q86WI1 4243 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 DNAH9Q9NYC9 4486 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 TRAV13-2A0A0B4J235 113 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 CTXND1A0A1B0GTU2 59 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 HCG22E2RYF7 251 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 SNCGO76070 127 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 SCGB1A1P11684 91 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 TMEM170BQ5T4T1 132 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 Q6AWC8 147 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 SEC11CQ9BY50 192 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 V9GYH0 126 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 ARHGEF12Q9NZN5 1544 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 PAPPA2Q9BXP8 1791 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 FMN2Q9NZ56 1722 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 NSD3Q9BZ95 1437 aa-0.55□□□□□ -2.5
TMF1-202ENST00000477872 PRRC2CQ9Y520 2896 aaKnown RBP-0.56□□□□□ -2.5
TMF1-202ENST00000477872 FOCADQ5VW36 1801 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 J3QR89 54 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 UQCR11O14957 56 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 TNFP01375 233 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 NEFHP12036 1026 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 GUCA1AP43080 201 aaPredicted RBP-0.56□□□□□ -2.5
TMF1-202ENST00000477872 C10orf128Q5T292 105 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 TAC4Q86UU9 113 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 SELENOSQ9BQE4 189 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 SMIM3Q9BZL3 60 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 GSKIPQ9P0R6 139 aa-0.56□□□□□ -2.5
TMF1-202ENST00000477872 ARHGEF5Q12774 1597 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 EPPK1P58107 5090 aaKnown RBP-0.57□□□□□ -2.5
TMF1-202ENST00000477872 EPG5Q9HCE0 2579 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 F8VRH5 84 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 M0R2Z0 102 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 TPPP2P59282 170 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 CKS1BP61024 79 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 KLK9Q2XQG4 91 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 BAGE2Q86Y30 109 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 TTC9CQ8N5M4 171 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 DEFB105AQ8NG35 78 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 MAFIPQ8WZ33 124 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 AQP10Q96PS8 301 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 FXYD6Q9H0Q3 95 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 NDUFA4L2Q9NRX3 87 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 LINC01558Q9Y6Z2 57 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 SHANK2Q9UPX8 1470 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 SPTBN4Q9H254 2564 aa-0.57□□□□□ -2.5
TMF1-202ENST00000477872 PHLPP1O60346 1717 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 QRICH2Q9H0J4 1663 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 TNRC18O15417 2968 aaPredicted RBP-0.58□□□□□ -2.5
TMF1-202ENST00000477872 POLA1P09884 1462 aaPredicted RBP-0.58□□□□□ -2.5
TMF1-202ENST00000477872 GRIN2AQ12879 1464 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 NBASA2RRP1 2371 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 IGLC7A0M8Q6 106 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 K7ERU9 68 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 APOC3P02656 99 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 KCNRGQ8N5I3 272 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 Q8N8P6 123 aa-0.58□□□□□ -2.5
TMF1-202ENST00000477872 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms