RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LINC00474Q9P2X8 69 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 BDP1A6H8Y1 2624 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 RGPD5Q99666 1765 aa1.44□□□□□ -2.18
SMNDC1-205ENST00000477763 PRUNE2Q8WUY3 3088 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 ANKRD26Q9UPS8 1709 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 PTPRZ1P23471 2315 aaPredicted RBP1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 SPTBN4Q9H254 2564 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 HIGD1CA8MV81 97 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 K7EP34 96 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 UBE2D1P51668 147 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 DEFB123Q8N688 67 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 AMELYQ99218 206 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 MGST2Q99735 147 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 NEXMIFQ5QGS0 1516 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 PAPPAQ13219 1627 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 RTTNQ86VV8 2226 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 KIAA1551Q9HCM1 1747 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 BTAF1O14981 1849 aa1.43□□□□□ -2.18
SMNDC1-205ENST00000477763 NCOR1O75376 2440 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 CDC42BPGQ6DT37 1551 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 MUC4Q99102 2169 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 PIEZO1Q92508 2521 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 E9PCH4 1651 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 CROCC2H7BZ55 1655 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 LAMB2P55268 1798 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 SDK1Q7Z5N4 2213 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 DIDO1Q9BTC0 2240 aaKnown RBP1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 CICQ96RK0 1608 aaPredicted RBP1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 TEX49A0A1B0GTD5 131 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 NDUFC1O43677 76 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 SFT2D2O95562 160 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 SEC11AP67812 179 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 C6orf52Q5T4I8 152 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 LINC00322Q6ZN03 302 aaPredicted RBP1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 CYP2G1PQ6ZSU1 146 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 TMEM14CQ9P0S9 112 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 HEATR5BQ9P2D3 2071 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 KIAA1549LQ6ZVL6 1849 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 ADGRB2O60241 1585 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 ALS2Q96Q42 1657 aa1.42□□□□□ -2.18
SMNDC1-205ENST00000477763 EIF2AK4Q9P2K8 1649 aaKnown RBP1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 ABCA3Q99758 1704 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 SETXQ7Z333 2677 aaKnown RBP1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 LOC110117498A0A087WWA1 95 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 PEA15Q15121 130 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 SERP2Q8N6R1 65 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 FAM167A-AS1Q96KT0 104 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 TRGV9Q99603 122 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 RABAC1Q9UI14 185 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 LAMA2P24043 3122 aaKnown RBP1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 CENPFP49454 3210 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 MCM3APO60318 1980 aa1.41□□□□□ -2.18
SMNDC1-205ENST00000477763 TULP4Q9NRJ4 1543 aa1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 LRRC37A3O60309 1634 aa1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 PARP4Q9UKK3 1724 aaKnown RBP1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 PHIPQ8WWQ0 1821 aa1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 NUMA1Q14980 2115 aa1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 LAMA3Q16787 3333 aa1.4□□□□□ -2.18
SMNDC1-205ENST00000477763 LMO7Q8WWI1 1683 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 TRBV7-3A0A075B6L6 115 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 CRYM-AS1A6NIL9 109 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 SPATA45Q537H7 98 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 C10orf128Q5T292 105 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 FAM213BQ8TBF2 198 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 S100A13Q99584 98 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 WFDC10AQ9H1F0 79 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 CACFD1Q9UGQ2 172 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 CHD6Q8TD26 2715 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 HELZ2Q9BYK8 2649 aaKnown RBP1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 CRYBG1Q9Y4K1 1723 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 CLTCL1P53675 1640 aa1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 TPRP12270 2363 aaKnown RBP1.4□□□□□ -2.19
SMNDC1-205ENST00000477763 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 LAMB1P07942 1786 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 CACNA1BQ00975 2339 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 PLIN4Q96Q06 1357 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 DNAL4O96015 105 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 CYB5AP00167 134 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 NMBP08949 121 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 FAUP35544 74 aaKnown RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 ELOF1P60002 83 aaKnown RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 UBE2D3P61077 147 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 UBE2D2P62837 147 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 S100A16Q96FQ6 103 aaKnown RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 C20orf78Q9BR46 151 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 SNURFQ9Y675 71 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 TOGARAM1Q9Y4F4 1720 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 EYSQ5T1H1 3165 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 IQGAP3Q86VI3 1631 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 KIAA1549Q9HCM3 1950 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 TRPM7Q96QT4 1865 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 ANKRD11Q6UB99 2663 aaPredicted RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 ANKARQ7Z5J8 1434 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 EPG5Q9HCE0 2579 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 RIF1Q5UIP0 2472 aaKnown RBP1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 PKD1L2Q7Z442 2459 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 TOPAZ1Q8N9V7 1692 aa1.39□□□□□ -2.19
SMNDC1-205ENST00000477763 SPTBN2O15020 2390 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms