RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
SEC13-215ENST00000477547 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
SEC13-215ENST00000477547 TIMM21Q9BVV7 248 aa10.31□□□□□ -0.76
SEC13-215ENST00000477547 LINC00614P0C842 121 aa10.3□□□□□ -0.76
SEC13-215ENST00000477547 G0S2P27469 103 aa10.3□□□□□ -0.76
SEC13-215ENST00000477547 REG3AQ06141 175 aa10.3□□□□□ -0.76
SEC13-215ENST00000477547 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 Q0VG73 95 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
SEC13-215ENST00000477547 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
SEC13-215ENST00000477547 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 IGKV3OR2-268A0A0C4DH90 116 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 C1orf196B1AJZ1 125 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
SEC13-215ENST00000477547 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 TOMM6Q96B49 74 aa10.28□□□□□ -0.76
SEC13-215ENST00000477547 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
SEC13-215ENST00000477547 SERF1AO75920 110 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 HBDP02042 147 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 PMCHL1Q16048 86 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 MIAQ16674 131 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 RMI2Q96E14 147 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 PYGO1Q9Y3Y4 419 aa10.27□□□□□ -0.77
SEC13-215ENST00000477547 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
SEC13-215ENST00000477547 A0A096LNJ9 63 aa10.26□□□□□ -0.77
SEC13-215ENST00000477547 HSBP1O75506 76 aa10.26□□□□□ -0.77
SEC13-215ENST00000477547 LINC00310P59036 64 aa10.26□□□□□ -0.77
SEC13-215ENST00000477547 C1orf43Q9BWL3 253 aa10.26□□□□□ -0.77
SEC13-215ENST00000477547 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
SEC13-215ENST00000477547 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
SEC13-215ENST00000477547 MRPS36P82909 103 aaKnown RBP10.25□□□□□ -0.77
SEC13-215ENST00000477547 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
SEC13-215ENST00000477547 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
SEC13-215ENST00000477547 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
SEC13-215ENST00000477547 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
SEC13-215ENST00000477547 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 RTL8CO15255 209 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 PSCAO43653 123 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 Q6ZN92 141 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 TMEM141Q96I45 108 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
SEC13-215ENST00000477547 DNAH2Q9P225 4427 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 NPSP0C0P6 89 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 ERASQ7Z444 233 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 KRTAP4-5Q9BYR2 181 aa10.23□□□□□ -0.77
SEC13-215ENST00000477547 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
SEC13-215ENST00000477547 TEX43Q6ZNM6 134 aa10.22□□□□□ -0.77
SEC13-215ENST00000477547 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 PDZD11Q5EBL8 140 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 C2orf88Q9BSF0 95 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 COX11Q9Y6N1 276 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.78
SEC13-215ENST00000477547 SS18Q15532 418 aa10.2□□□□□ -0.78
SEC13-215ENST00000477547 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
SEC13-215ENST00000477547 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
SEC13-215ENST00000477547 DNAH11Q96DT5 4516 aa10.19□□□□□ -0.78
SEC13-215ENST00000477547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
SEC13-215ENST00000477547 NUPR1O60356 82 aa10.19□□□□□ -0.78
SEC13-215ENST00000477547 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
SEC13-215ENST00000477547 VCX2Q9H322 139 aa10.19□□□□□ -0.78
SEC13-215ENST00000477547 CCL25O15444 150 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 ATP5LO75964 103 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 XCL1P47992 114 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 NDUFA6P56556 154 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 LINC00336Q6ZUF6 198 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 AMELXQ99217 191 aa10.18□□□□□ -0.78
SEC13-215ENST00000477547 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
SEC13-215ENST00000477547 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
SEC13-215ENST00000477547 TNP2Q05952 138 aa10.17□□□□□ -0.78
SEC13-215ENST00000477547 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
SEC13-215ENST00000477547 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
SEC13-215ENST00000477547 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
SEC13-215ENST00000477547 A0A1B0GVY2 172 aa10.15□□□□□ -0.78
SEC13-215ENST00000477547 LEPROTL1O95214 131 aa10.15□□□□□ -0.78
SEC13-215ENST00000477547 UBE2D1P51668 147 aa10.15□□□□□ -0.78
SEC13-215ENST00000477547 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
SEC13-215ENST00000477547 IFI27L1Q96BM0 104 aa10.15□□□□□ -0.78
SEC13-215ENST00000477547 LECT2O14960 151 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms