RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 KDM6BO15054 1643 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 MYO3AQ8NEV4 1616 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 TECTAO75443 2155 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 TRBV6-8A0A0A6YYG3 113 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 MYMXA0A1B0GTQ4 84 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 TRBV6-4A0A1B0GX49 114 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 HIGD1CA8MV81 97 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 F8WEM9 126 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 SMIM13P0DJ93 91 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 COX8AP10176 69 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 CCL3L1P16619 93 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 ELOF1P60002 83 aaKnown RBP0.72□□□□□ -2.29
TARDBP-208ENST00000477447 SFTA2Q6UW10 78 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 Q86TA4 180 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 AMELXQ99217 191 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 DYNLRB1Q9NP97 96 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 PLAC8Q9NZF1 115 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 ORMDL1Q9P0S3 153 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 UBE2D4Q9Y2X8 147 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 LENEPQ9Y5L5 61 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 SBF2Q86WG5 1849 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 HEATR5BQ9P2D3 2071 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 MRC1P22897 1456 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 KIF1AQ12756 1690 aa0.72□□□□□ -2.29
TARDBP-208ENST00000477447 KIF13AQ9H1H9 1805 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 CEP170BQ9Y4F5 1589 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-208ENST00000477447 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 LAMB4A4D0S4 1761 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 CASZ1Q86V15 1759 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 URB2Q14146 1524 aaKnown RBP0.71□□□□□ -2.3
TARDBP-208ENST00000477447 NBDYA0A0U1RRE5 68 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 SAA2P0DJI9 122 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-208ENST00000477447 CCL18P55774 89 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 SMIM11AP58511 58 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 PSMG4Q5JS54 123 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 C4orf3Q8WVX3 66 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 PEAK1Q9H792 1746 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 AKAP11Q9UKA4 1901 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 ZFHX2Q9C0A1 2572 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-208ENST00000477447 OBSL1O75147 1896 aa0.71□□□□□ -2.3
TARDBP-208ENST00000477447 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 PLXNC1O60486 1568 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 ARHGEF5Q12774 1597 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 LAMB1P07942 1786 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 MCM3APO60318 1980 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 TNS1Q9HBL0 1735 aaKnown RBP0.7□□□□□ -2.3
TARDBP-208ENST00000477447 MGAMO43451 1857 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 MYOM1P52179 1685 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 TRBV7-4A0A0J9YYF1 115 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 CEBPZOSA8MTT3 80 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 JMJD7-PLA2G4BH0Y9G9 81 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 FXYD1O00168 92 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 PPP1R17O96001 155 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 PPYP01298 95 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 C3orf79P0CE67 100 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 HMGA1P17096 107 aaKnown RBP0.7□□□□□ -2.3
TARDBP-208ENST00000477447 GCHFRP30047 84 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
TARDBP-208ENST00000477447 PLGLAQ15195 96 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 FAM74A4Q5TZK3 123 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 Q6JHZ5 121 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 COX7B2Q8TF08 81 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 PPP1R1CQ8WVI7 109 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 HILPDAQ9Y5L2 63 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 ARL2-SNX15V9GYD0 113 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 V9GYH0 126 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 ABCA9Q8IUA7 1624 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 RAPGEF6Q8TEU7 1601 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 RP1P56715 2156 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 GLI2P10070 1586 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 TIAM1Q13009 1591 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 MED12LQ86YW9 2145 aa0.7□□□□□ -2.3
TARDBP-208ENST00000477447 TOP2AP11388 1531 aaKnown RBP0.69□□□□□ -2.3
TARDBP-208ENST00000477447 PPRC1Q5VV67 1664 aaKnown RBP0.69□□□□□ -2.3
TARDBP-208ENST00000477447 KIF21AQ7Z4S6 1674 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 CTTNBP2Q8WZ74 1663 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 RALGAPBQ86X10 1494 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 TOP2BQ02880 1626 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 LOC110117498A0A087WWA1 95 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 FXYD6-FXYD2A0A087WZ82 144 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 LOC285095A0A1B0GVY8 99 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 A0A1B0GWA3 101 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 F8VRH5 84 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 M0R2N4 97 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 IFI27P40305 119 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-208ENST00000477447 SPINT3P49223 89 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 ZNF137PP52743 207 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 RPL37AP61513 92 aaKnown RBP0.69□□□□□ -2.3
TARDBP-208ENST00000477447 SPAG11BQ08648 103 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 FXYD3Q14802 87 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 ATP5EP2Q5VTU8 51 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 SPAG11AQ6PDA7 123 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 SPRR4Q96PI1 79 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 PRR15LQ9BU68 103 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 LINC01558Q9Y6Z2 57 aa0.69□□□□□ -2.3
TARDBP-208ENST00000477447 MUC22E2RYF6 1773 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms