RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LINC01006Q8NI28 216 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 LINC01560Q8TB33 94 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 S4R3C0 116 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 MPDZO75970 2070 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGLV1-50A0A075B6I6 118 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 A0A087WVE0 104 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 A0A1B0GVX0 72 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 PIN1P1O15428 100 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 PSCAO43653 123 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 LY6HO94772 140 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGKV1D-33P01593 117 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGKV1-33P01594 117 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGLV3-25P01717 112 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGHV3-23P01764 117 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGHV3-33P01772 117 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 RPL28P46779 137 aaKnown RBP1.54□□□□□ -2.16
XRN1-211ENST00000477237 SPINT3P49223 89 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 EDDM3BP56851 147 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 EIF4EBP1Q13541 118 aaPredicted RBP1.54□□□□□ -2.16
XRN1-211ENST00000477237 CASC2Q6XLA1 102 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 Q6ZR03 302 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 Q8N9L7 120 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 CAMK2N2Q96S95 79 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 MUC4Q99102 2169 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 MYO7AQ13402 2215 aa1.54□□□□□ -2.16
XRN1-211ENST00000477237 IGLV3-16A0A075B6K0 115 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 A0A087WSZ3 146 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 A0A0J9YXY3 114 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 CXorf51AA0A1B0GTR3 108 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 C11orf86A6NJI1 115 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 ZNF815PA8K554 130 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 CHKB-CPT1BH3BT56 60 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 CRPP02741 224 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 BAALC-AS2P0C853 105 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 P0C880 135 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
XRN1-211ENST00000477237 C15orf56Q8N910 161 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 C1orf64Q8NEQ6 169 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 MUC7Q8TAX7 377 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
XRN1-211ENST00000477237 ZNF355PQ9NSJ1 428 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
XRN1-211ENST00000477237 HEATR1Q9H583 2144 aaKnown RBP1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-15A0A0B4J1V0 119 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-66A0A0C4DH42 116 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV5-10-1A0A0J9YXX1 117 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 A6NDX4 124 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 K7ERS5 55 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 BPY2O14599 106 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-30P01768 117 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 TRGV3P03979 118 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 ARMS2P0C7Q2 107 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-30-5P0DP03 117 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 COX6B1P14854 86 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 IL9P15248 144 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 FXYD6P3P58550 94 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 NNATQ16517 81 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 LYZL1Q6UWQ5 148 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 C2orf66Q6UXQ4 117 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 Q6ZQT0 140 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 NTM-AS1Q6ZSK4 140 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 LYZL2Q7Z4W2 148 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 LYPD6Q86Y78 171 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 Q8N9W7 124 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 TMEM254Q8TBM7 123 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 CIRBP-AS1Q8TBR5 109 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 OBSCN-AS1Q96MR7 158 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 SMIM14Q96QK8 99 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 CHCHD7Q9BUK0 85 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 RPP21Q9H633 154 aaKnown RBP1.52□□□□□ -2.17
XRN1-211ENST00000477237 NDUFA4L2Q9NRX3 87 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 DEC1Q9P2X7 70 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 KLK12Q9UKR0 248 aa1.52□□□□□ -2.17
XRN1-211ENST00000477237 TET2Q6N021 2002 aaPredicted RBP1.51□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3OR16-8A0A075B7F1 116 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 IGHV3-49A0A0A0MS15 119 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 A6NED7 52 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 IGLV1-47P01700 117 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 TLX1NBP0CAT3 122 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 SAA2P0DJI9 122 aaPredicted RBP1.51□□□□□ -2.17
XRN1-211ENST00000477237 IGHV1-8P0DP01 117 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 DEFA4P12838 97 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 CD24P25063 80 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 PLNP26678 52 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 FCER1GP30273 86 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 C10orf128Q5T292 105 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 FAM27BQ5VT28 67 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 IMMP1LQ96LU5 166 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 C22orf24Q9Y442 160 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 TNRC6BQ9UPQ9 1833 aaKnown RBP1.51□□□□□ -2.17
XRN1-211ENST00000477237 ZNF407Q9C0G0 2248 aa1.51□□□□□ -2.17
XRN1-211ENST00000477237 MED13Q9UHV7 2174 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms