RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 RTTNQ86VV8 2226 aa2.86□□□□□ -1.95
NUP58-209ENST00000476553 ABCC1P33527 1531 aa2.86□□□□□ -1.95
NUP58-209ENST00000476553 ADGRB2O60241 1585 aa2.86□□□□□ -1.95
NUP58-209ENST00000476553 BLMP54132 1417 aaPredicted RBP2.85□□□□□ -1.95
NUP58-209ENST00000476553 EHBP1L1Q8N3D4 1523 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 ARFGEF1Q9Y6D6 1849 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 NBDYA0A0U1RRE5 68 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 CFAP126Q5VTH2 177 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 SPAG11AQ6PDA7 123 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 C18orf32Q8TCD1 76 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 IQGAP3Q86VI3 1631 aa2.85□□□□□ -1.95
NUP58-209ENST00000476553 MDC1Q14676 2089 aaKnown RBP2.84□□□□□ -1.95
NUP58-209ENST00000476553 ARHGEF5Q12774 1597 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 IGKV1-17P01599 117 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 IL9P15248 144 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 TMEM170BQ5T4T1 132 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 XAF1Q6GPH4 301 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 PPP1R1CQ8WVI7 109 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 TMEM14BQ9NUH8 114 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 KIF21AQ7Z4S6 1674 aa2.84□□□□□ -1.95
NUP58-209ENST00000476553 COL5A3P25940 1745 aaPredicted RBP2.84□□□□□ -1.96
NUP58-209ENST00000476553 SPAG17Q6Q759 2223 aa2.84□□□□□ -1.96
NUP58-209ENST00000476553 MRC1P22897 1456 aa2.84□□□□□ -1.96
NUP58-209ENST00000476553 FN1P02751 2386 aaKnown RBP2.83□□□□□ -1.96
NUP58-209ENST00000476553 HMGXB3Q12766 1538 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 MAGI3Q5TCQ9 1506 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 THOC2Q8NI27 1593 aaKnown RBP2.83□□□□□ -1.96
NUP58-209ENST00000476553 SCN11AQ9UI33 1791 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
NUP58-209ENST00000476553 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
NUP58-209ENST00000476553 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 FXYD3Q14802 87 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 HEPN1Q6WQI6 88 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 ZNF625Q96I27 306 aaPredicted RBP2.83□□□□□ -1.96
NUP58-209ENST00000476553 AMELXQ99217 191 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 SPTBP11277 2137 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 FREM1Q5H8C1 2179 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 DOCK10Q96BY6 2186 aa2.83□□□□□ -1.96
NUP58-209ENST00000476553 MYO5CQ9NQX4 1742 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 IGKV2-29A2NJV5 120 aaPredicted RBP2.82□□□□□ -1.96
NUP58-209ENST00000476553 ZNF815PA8K554 130 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 C10orf142B7Z368 130 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 SAA2P0DJI9 122 aaPredicted RBP2.82□□□□□ -1.96
NUP58-209ENST00000476553 HMGN3Q15651 99 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 PSMG4Q5JS54 123 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 S100ZQ8WXG8 99 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 R4GMQ9 66 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 LRRC9Q6ZRR7 1453 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 MROH1Q8NDA8 1641 aa2.82□□□□□ -1.96
NUP58-209ENST00000476553 FXYD4P59646 89 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 C5orf56Q8N8D9 126 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 V9GYV3 84 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 LOC285556D6RIA3 1793 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 PDCD11Q14690 1871 aaKnown RBP2.81□□□□□ -1.96
NUP58-209ENST00000476553 DOCK11Q5JSL3 2073 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 PI4KAP42356 2102 aa2.81□□□□□ -1.96
NUP58-209ENST00000476553 INO80Q9ULG1 1556 aaPredicted RBP2.8□□□□□ -1.96
NUP58-209ENST00000476553 NEXMIFQ5QGS0 1516 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 ABCC2Q92887 1545 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 F8WEM9 126 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 HMGN2P05204 90 aaKnown RBP2.8□□□□□ -1.96
NUP58-209ENST00000476553 CCL18P55774 89 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 ARL2-SNX15V9GYD0 113 aa2.8□□□□□ -1.96
NUP58-209ENST00000476553 RGPD8O14715 1765 aaPredicted RBP2.79□□□□□ -1.96
NUP58-209ENST00000476553 RGPD5Q99666 1765 aa2.79□□□□□ -1.96
NUP58-209ENST00000476553 BTAF1O14981 1849 aa2.79□□□□□ -1.96
NUP58-209ENST00000476553 RGPD2P0DJD1 1756 aa2.79□□□□□ -1.96
NUP58-209ENST00000476553 KNDC1Q76NI1 1749 aa2.79□□□□□ -1.96
NUP58-209ENST00000476553 AFDNP55196 1824 aaKnown RBP2.78□□□□□ -1.96
NUP58-209ENST00000476553 TNRC6BQ9UPQ9 1833 aaKnown RBP2.78□□□□□ -1.96
NUP58-209ENST00000476553 A0A087WTM6 91 aa2.78□□□□□ -1.96
NUP58-209ENST00000476553 ABCA4P78363 2273 aa2.78□□□□□ -1.96
NUP58-209ENST00000476553 PHRF1Q9P1Y6 1649 aaKnown RBP2.78□□□□□ -1.96
NUP58-209ENST00000476553 LAMA4Q16363 1823 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 SIPA1L3O60292 1781 aaPredicted RBP2.77□□□□□ -1.97
NUP58-209ENST00000476553 SCN7AQ01118 1682 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 FAM223BA6NKX1 122 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 F8VRH5 84 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 HCRTO43612 131 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 GDF5OSQ5U4N7 250 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 ZNF563Q8TA94 476 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 DUOX2Q9NRD8 1548 aa2.77□□□□□ -1.97
NUP58-209ENST00000476553 SETBP1Q9Y6X0 1596 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 TRGV2A0A075B6R0 118 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 PSENENQ9NZ42 101 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 KDM3BQ7LBC6 1761 aa2.76□□□□□ -1.97
NUP58-209ENST00000476553 TMEM131LA2VDJ0 1609 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 GBF1Q92538 1859 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 CUX1P39880 1505 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 IQCF6A8MYZ5 107 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 SMIM13P0DJ93 91 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 WFDC6Q9BQY6 131 aa2.75□□□□□ -1.97
NUP58-209ENST00000476553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms