RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 PRSS3P2Q8NHM4 247 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 PKHD1P08F94 4074 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BKO60814 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BJP06899 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BOP23527 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BBP33778 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BDP58876 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 RAB5BP61020 215 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BCP62807 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 Q0VG73 95 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST2H2BEQ16778 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.6□□□□□ -0.87
CCNL1-217ENST00000476367 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
CCNL1-217ENST00000476367 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BHQ93079 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BNQ99877 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 HIST1H2BMQ99879 126 aa9.6□□□□□ -0.87
CCNL1-217ENST00000476367 OPRPNQ99935 248 aaPredicted RBP9.6□□□□□ -0.87
CCNL1-217ENST00000476367 CSDC2Q9Y534 153 aaKnown RBP9.6□□□□□ -0.87
CCNL1-217ENST00000476367 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
CCNL1-217ENST00000476367 NUPR1O60356 82 aa9.59□□□□□ -0.87
CCNL1-217ENST00000476367 LINC00614P0C842 121 aa9.59□□□□□ -0.87
CCNL1-217ENST00000476367 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
CCNL1-217ENST00000476367 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 RMI2Q96E14 147 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
CCNL1-217ENST00000476367 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
CCNL1-217ENST00000476367 REG3AQ06141 175 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 PMCHL1Q16048 86 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 Q6ZUT4 128 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
CCNL1-217ENST00000476367 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
CCNL1-217ENST00000476367 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
CCNL1-217ENST00000476367 A0A087WTM6 91 aa9.56□□□□□ -0.88
CCNL1-217ENST00000476367 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
CCNL1-217ENST00000476367 MIAQ16674 131 aa9.56□□□□□ -0.88
CCNL1-217ENST00000476367 PYGO1Q9Y3Y4 419 aa9.56□□□□□ -0.88
CCNL1-217ENST00000476367 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 SERF1AO75920 110 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 CYSLTR1Q9Y271 337 aa9.55□□□□□ -0.88
CCNL1-217ENST00000476367 EREGO14944 169 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 LECT2O14960 151 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 ZC2HC1BQ5TFG8 222 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
CCNL1-217ENST00000476367 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCNL1-217ENST00000476367 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
CCNL1-217ENST00000476367 TMEM18Q96B42 140 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 CHCHD1Q96BP2 118 aaKnown RBP9.53□□□□□ -0.88
CCNL1-217ENST00000476367 LRCOL1A6NCL2 159 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 WFDC2Q14508 124 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 PDZD11Q5EBL8 140 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
CCNL1-217ENST00000476367 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
CCNL1-217ENST00000476367 BAGE3Q86Y29 109 aa9.52□□□□□ -0.89
CCNL1-217ENST00000476367 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
CCNL1-217ENST00000476367 AMELXQ99217 191 aa9.52□□□□□ -0.89
CCNL1-217ENST00000476367 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
CCNL1-217ENST00000476367 ERASQ7Z444 233 aa9.51□□□□□ -0.89
CCNL1-217ENST00000476367 TIMM17AQ99595 171 aa9.51□□□□□ -0.89
CCNL1-217ENST00000476367 SMAGPQ0VAQ4 97 aa9.5□□□□□ -0.89
CCNL1-217ENST00000476367 COA6Q5JTJ3 125 aaKnown RBP9.5□□□□□ -0.89
CCNL1-217ENST00000476367 C5orf52A6NGY3 159 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 HBDP02042 147 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 S100A6P06703 90 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 NPSP0C0P6 89 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 Q8N814 137 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
CCNL1-217ENST00000476367 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
CCNL1-217ENST00000476367 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
CCNL1-217ENST00000476367 G0S2P27469 103 aa9.47□□□□□ -0.89
CCNL1-217ENST00000476367 FOXI1Q12951 378 aa9.47□□□□□ -0.89
CCNL1-217ENST00000476367 CHCHD10Q8WYQ3 142 aaPredicted RBP9.47□□□□□ -0.89
CCNL1-217ENST00000476367 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
CCNL1-217ENST00000476367 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.89
CCNL1-217ENST00000476367 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.89
CCNL1-217ENST00000476367 USP17L23D6RBM5 183 aa9.46□□□□□ -0.89
CCNL1-217ENST00000476367 HSBP1O75506 76 aa9.46□□□□□ -0.89
CCNL1-217ENST00000476367 UBE2D1P51668 147 aa9.46□□□□□ -0.89
CCNL1-217ENST00000476367 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms