RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CSDC2Q9Y534 153 aaKnown RBP19.67■□□□□ 0.74
HOXB3-208ENST00000476342 IFI27P40305 119 aaPredicted RBP19.65■□□□□ 0.74
HOXB3-208ENST00000476342 ORMDL2Q53FV1 153 aa19.65■□□□□ 0.74
HOXB3-208ENST00000476342 TIMM21Q9BVV7 248 aa19.65■□□□□ 0.74
HOXB3-208ENST00000476342 RPL39P62891 51 aaKnown RBP19.64■□□□□ 0.73
HOXB3-208ENST00000476342 CDC42SE2Q9NRR3 84 aa19.64■□□□□ 0.73
HOXB3-208ENST00000476342 IGKV3OR2-268A0A0C4DH90 116 aa19.63■□□□□ 0.73
HOXB3-208ENST00000476342 PRSS3P2Q8NHM4 247 aa19.63■□□□□ 0.73
HOXB3-208ENST00000476342 LRCOL1A6NCL2 159 aa19.62■□□□□ 0.73
HOXB3-208ENST00000476342 ZNF664Q8N3J9 261 aa19.62■□□□□ 0.73
HOXB3-208ENST00000476342 IGLV10-54A0A075B6I4 117 aa19.61■□□□□ 0.73
HOXB3-208ENST00000476342 SPANXA1Q9NS26 97 aa19.61■□□□□ 0.73
HOXB3-208ENST00000476342 MAPKAPK5-AS1Q8N8E1 139 aa19.6■□□□□ 0.73
HOXB3-208ENST00000476342 DNAH11Q96DT5 4516 aa19.6■□□□□ 0.73
HOXB3-208ENST00000476342 SPATA12Q7Z6I5 190 aa19.59■□□□□ 0.73
HOXB3-208ENST00000476342 G0S2P27469 103 aa19.58■□□□□ 0.72
HOXB3-208ENST00000476342 CYSLTR1Q9Y271 337 aa19.58■□□□□ 0.72
HOXB3-208ENST00000476342 BAALCQ8WXS3 180 aa19.57■□□□□ 0.72
HOXB3-208ENST00000476342 C2orf66Q6UXQ4 117 aa19.56■□□□□ 0.72
HOXB3-208ENST00000476342 Q6ZUT4 128 aa19.56■□□□□ 0.72
HOXB3-208ENST00000476342 KRTAP26-1Q6PEX3 210 aa19.55■□□□□ 0.72
HOXB3-208ENST00000476342 FA2HQ7L5A8 372 aa19.55■□□□□ 0.72
HOXB3-208ENST00000476342 PYGO1Q9Y3Y4 419 aa19.55■□□□□ 0.72
HOXB3-208ENST00000476342 PKHD1P08F94 4074 aa19.55■□□□□ 0.72
HOXB3-208ENST00000476342 LECT2O14960 151 aa19.54■□□□□ 0.72
HOXB3-208ENST00000476342 Q8N814 137 aa19.54■□□□□ 0.72
HOXB3-208ENST00000476342 C18orf32Q8TCD1 76 aa19.54■□□□□ 0.72
HOXB3-208ENST00000476342 LINC00959A0A1B0GUT2 108 aa19.53■□□□□ 0.72
HOXB3-208ENST00000476342 MRPS36P82909 103 aaKnown RBP19.53■□□□□ 0.72
HOXB3-208ENST00000476342 LINC01546A6NGU7 62 aa19.52■□□□□ 0.72
HOXB3-208ENST00000476342 KRTAP10-2P60368 255 aa19.52■□□□□ 0.72
HOXB3-208ENST00000476342 WFDC2Q14508 124 aa19.52■□□□□ 0.72
HOXB3-208ENST00000476342 SS18Q15532 418 aa19.52■□□□□ 0.72
HOXB3-208ENST00000476342 RNASE13Q5GAN3 156 aaKnown RBP19.52■□□□□ 0.72
HOXB3-208ENST00000476342 CHCHD10Q8WYQ3 142 aaPredicted RBP19.52■□□□□ 0.72
HOXB3-208ENST00000476342 PGPEP1Q9NXJ5 209 aa19.52■□□□□ 0.72
HOXB3-208ENST00000476342 CDPF1Q6NVV7 123 aa19.51■□□□□ 0.71
HOXB3-208ENST00000476342 COLCA2A8K830 154 aa19.5■□□□□ 0.71
HOXB3-208ENST00000476342 CCL25O15444 150 aa19.5■□□□□ 0.71
HOXB3-208ENST00000476342 C14orf177Q52M58 125 aa19.5■□□□□ 0.71
HOXB3-208ENST00000476342 GAGE12HA6NDE8 117 aa19.49■□□□□ 0.71
HOXB3-208ENST00000476342 SCO1O75880 301 aa19.49■□□□□ 0.71
HOXB3-208ENST00000476342 NTN5Q8WTR8 489 aaPredicted RBP19.49■□□□□ 0.71
HOXB3-208ENST00000476342 AP5S1Q9NUS5 200 aa19.49■□□□□ 0.71
HOXB3-208ENST00000476342 LINC01549A6NIU2 74 aa19.48■□□□□ 0.71
HOXB3-208ENST00000476342 C16orf90A8MZG2 172 aa19.48■□□□□ 0.71
HOXB3-208ENST00000476342 OPRPNQ99935 248 aaPredicted RBP19.48■□□□□ 0.71
HOXB3-208ENST00000476342 C1orf196B1AJZ1 125 aa19.47■□□□□ 0.71
HOXB3-208ENST00000476342 XCL1P47992 114 aa19.47■□□□□ 0.71
HOXB3-208ENST00000476342 FAM104AQ969W3 186 aa19.47■□□□□ 0.71
HOXB3-208ENST00000476342 TOMM6Q96B49 74 aa19.47■□□□□ 0.71
HOXB3-208ENST00000476342 IGLV4-3A0A075B6K6 122 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 TRAV13-1A0A0B4J241 112 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 USP17L23D6RBM5 183 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 TRGC2P03986 189 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 NPSP0C0P6 89 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 RAB5BP61020 215 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 TMEM141Q96I45 108 aa19.46■□□□□ 0.71
HOXB3-208ENST00000476342 LINC00614P0C842 121 aa19.45■□□□□ 0.7
HOXB3-208ENST00000476342 Q6ZN92 141 aa19.45■□□□□ 0.7
HOXB3-208ENST00000476342 S100A1P23297 94 aa19.44■□□□□ 0.7
HOXB3-208ENST00000476342 IFITM10A6NMD0 228 aa19.43■□□□□ 0.7
HOXB3-208ENST00000476342 IGIPA6NJ69 53 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 FOXI1Q12951 378 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 CD164L2Q6UWJ8 174 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 TEX43Q6ZNM6 134 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 TIMM17AQ99595 171 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.42■□□□□ 0.7
HOXB3-208ENST00000476342 IGLV5-52A0A0A0MRZ9 124 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 PAPPA-AS1Q5QFB9 102 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 URB1-AS1Q96HZ7 61 aa19.42■□□□□ 0.7
HOXB3-208ENST00000476342 DNAH5Q8TE73 4624 aa19.41■□□□□ 0.7
HOXB3-208ENST00000476342 BIRC6Q9NR09 4857 aa19.41■□□□□ 0.7
HOXB3-208ENST00000476342 ATP6V1G1O75348 118 aa19.41■□□□□ 0.7
HOXB3-208ENST00000476342 FUSP35637 526 aaKnown RBP eCLIP19.41■□□□□ 0.7
HOXB3-208ENST00000476342 CFAP161Q6P656 301 aa19.4■□□□□ 0.7
HOXB3-208ENST00000476342 ERASQ7Z444 233 aa19.4■□□□□ 0.7
HOXB3-208ENST00000476342 SCGB3A1Q96QR1 104 aa19.4■□□□□ 0.7
HOXB3-208ENST00000476342 C2orf88Q9BSF0 95 aa19.4■□□□□ 0.7
HOXB3-208ENST00000476342 DYNC1H1Q14204 4646 aaKnown RBP19.39■□□□□ 0.69
HOXB3-208ENST00000476342 VCX2Q9H322 139 aa19.39■□□□□ 0.69
HOXB3-208ENST00000476342 AMELXQ99217 191 aa19.36■□□□□ 0.69
HOXB3-208ENST00000476342 CHCHD1Q96BP2 118 aaKnown RBP19.35■□□□□ 0.69
HOXB3-208ENST00000476342 HBDP02042 147 aa19.34■□□□□ 0.69
HOXB3-208ENST00000476342 PRSS1P07477 247 aa19.34■□□□□ 0.69
HOXB3-208ENST00000476342 hDV102S1A0JD36 115 aa19.34■□□□□ 0.69
HOXB3-208ENST00000476342 BAGE3Q86Y29 109 aa19.34■□□□□ 0.69
HOXB3-208ENST00000476342 COX7A2LO14548 114 aa19.33■□□□□ 0.68
HOXB3-208ENST00000476342 GCSHP23434 173 aa19.33■□□□□ 0.68
HOXB3-208ENST00000476342 LINC00173Q6ZV60 143 aa19.33■□□□□ 0.68
HOXB3-208ENST00000476342 C15orf56Q8N910 161 aa19.33■□□□□ 0.68
HOXB3-208ENST00000476342 A0A096LNJ9 63 aa19.31■□□□□ 0.68
HOXB3-208ENST00000476342 IGHV1-58A0A0C4DH39 117 aa19.31■□□□□ 0.68
HOXB3-208ENST00000476342 MALP21145 153 aa19.31■□□□□ 0.68
HOXB3-208ENST00000476342 UBE2D1P51668 147 aa19.31■□□□□ 0.68
HOXB3-208ENST00000476342 LRP1BQ9NZR2 4599 aa19.3■□□□□ 0.68
HOXB3-208ENST00000476342 PMCHL1Q16048 86 aa19.3■□□□□ 0.68
HOXB3-208ENST00000476342 ZC2HC1BQ5TFG8 222 aa19.3■□□□□ 0.68
HOXB3-208ENST00000476342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.29■□□□□ 0.68
HOXB3-208ENST00000476342 LINC00242Q5T6M2 205 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms