RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 C11orf86A6NJI1 115 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 ADAP1O75689 374 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 NDUFB6O95139 128 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 IL5P05113 134 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 OR4E1P0C645 316 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 HTN3P15516 51 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 S100A7P31151 101 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 S100A5P33763 92 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 TAS2R45P59539 299 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 TAS2R30P59541 319 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 B2MP61769 119 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 POLR2GP62487 172 aaKnown RBP eCLIP1.68□□□□□ -2.14
PTCD3-211ENST00000476215 RRN3P1Q2M238 152 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 TMEM14EPQ6UXP3 125 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 CYP2G1PQ6ZSU1 146 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 ATP5L2Q7Z4Y8 100 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 S100A7AQ86SG5 101 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 STOML3Q8TAV4 291 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF625Q96I27 306 aaPredicted RBP1.68□□□□□ -2.14
PTCD3-211ENST00000476215 TMEM147Q9BVK8 224 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 GGACTQ9BVM4 153 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF471Q9BX82 626 aaPredicted RBP1.68□□□□□ -2.14
PTCD3-211ENST00000476215 NPVFQ9HCQ7 196 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 PSENENQ9NZ42 101 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 GSKIPQ9P0R6 139 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 HIGD1AQ9Y241 93 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 V9GYH0 126 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 TRAV12-2A0A075B6T6 113 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 LINC00854A0A1B0GVQ3 168 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 CCDC160A6NGH7 325 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 F5H768 121 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 H3BQ15 152 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 H7BYZ3 331 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 M0R2Z0 102 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 SLC17A3O00476 420 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 PLA2G10O15496 165 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 GNRH2O43555 120 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 SSSCA1O60232 199 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 OR5G3P0C626 314 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 METTL15P1P0C7V9 234 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 DEFB130BP0DP73 79 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 DEFB130AP0DP74 79 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 HTN1P15515 57 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 RPL7P18124 248 aaKnown RBP1.67□□□□□ -2.14
PTCD3-211ENST00000476215 CXCL3P19876 107 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 RRAS2P62070 204 aaPredicted RBP1.67□□□□□ -2.14
PTCD3-211ENST00000476215 RHOBP62745 196 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 HERVK_113P63121 156 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 AKR1C1Q04828 323 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 SMAGPQ0VAQ4 97 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 SPINK13Q1W4C9 94 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 IAH1Q2TAA2 248 aaPredicted RBP1.67□□□□□ -2.14
PTCD3-211ENST00000476215 C1orf134Q5TEV5 83 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 LINC00305Q7Z4B0 112 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 C15orf53Q8NAA6 179 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 GNB1LQ9BYB4 327 aa1.67□□□□□ -2.14
PTCD3-211ENST00000476215 TIMM8BQ9Y5J9 83 aaPredicted RBP1.67□□□□□ -2.14
PTCD3-211ENST00000476215 TRAV5A0A0B4J249 113 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 TRAV12-3A0A0B4J271 114 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 NBDYA0A0U1RRE5 68 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 FAM24AA6NFZ4 105 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 NDUFS6O75380 124 aaKnown RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 CST7O76096 145 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 TCRBP04435 133 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 ATP5G1P05496 136 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 IGLC2P0DOY2 106 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 PRB4P10163 310 aaPredicted RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 CXCL2P19875 107 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 S100A11P31949 105 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 ATP5G3P48201 142 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 CCL18P55774 89 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 HIST1H1AQ02539 215 aaPredicted RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 SLC38A11Q08AI6 406 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 GUK1Q16774 197 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 ESRGQ1W209 222 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 C10orf113Q5VZT2 155 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 TRIQKQ629K1 86 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 LCN15Q6UWW0 184 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 BPIFA4PQ86YQ2 179 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 BAP18Q8IXM2 172 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 C12orf45Q8N5I9 185 aaPredicted RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF431Q8TF32 576 aaPredicted RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 C2orf50Q96LR7 162 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 MGST2Q99735 147 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 MIEN1Q9BRT3 115 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 AGPAT4-IT1Q9H0P7 198 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 NOP10Q9NPE3 64 aaKnown RBP1.66□□□□□ -2.14
PTCD3-211ENST00000476215 PXMP4Q9Y6I8 212 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
PTCD3-211ENST00000476215 TRBV19A0A075B6N1 114 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 A0A0J9YY99 117 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 H3BNG1 76 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 J3QQQ9 107 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 UBE2L6O14933 153 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 LYRM1O43325 122 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 SLC25A5P05141 298 aaKnown RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 NMBP08949 121 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 HIST1H1EP10412 219 aaKnown RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 IL7P13232 177 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms