RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 LY96Q9Y6Y9 160 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 RBAKDNA6NC62 111 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 CSN1S1P47710 185 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 SPINK13Q1W4C9 94 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 OR5C1Q8NGR4 320 aa8.24□□□□□ -1.09
HLA-DOB-208ENST00000475235 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 MORN5Q5VZ52 161 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 FMC1Q96HJ9 113 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 NPCDR1Q9BY65 106 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
HLA-DOB-208ENST00000475235 A8MWV9 139 aa8.22□□□□□ -1.09
HLA-DOB-208ENST00000475235 H3BS24 57 aa8.22□□□□□ -1.09
HLA-DOB-208ENST00000475235 SCGB1C2P0DMR2 95 aa8.22□□□□□ -1.09
HLA-DOB-208ENST00000475235 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
HLA-DOB-208ENST00000475235 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.09
HLA-DOB-208ENST00000475235 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 SERF2P84101 59 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 AP5S1Q9NUS5 200 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 AGRNO00468 2067 aa8.21□□□□□ -1.1
HLA-DOB-208ENST00000475235 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
HLA-DOB-208ENST00000475235 ATOX1O00244 68 aa8.2□□□□□ -1.1
HLA-DOB-208ENST00000475235 CXCL5P42830 114 aa8.2□□□□□ -1.1
HLA-DOB-208ENST00000475235 MRPS36P82909 103 aaKnown RBP8.2□□□□□ -1.1
HLA-DOB-208ENST00000475235 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
HLA-DOB-208ENST00000475235 TRBV19A0A075B6N1 114 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 IGKCP01834 107 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 PDE6HQ13956 83 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 TIMM9Q9Y5J7 89 aa8.19□□□□□ -1.1
HLA-DOB-208ENST00000475235 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
HLA-DOB-208ENST00000475235 F2Z2F3 143 aa8.18□□□□□ -1.1
HLA-DOB-208ENST00000475235 DAD1P61803 113 aa8.18□□□□□ -1.1
HLA-DOB-208ENST00000475235 PRAC2D3DTV9 90 aa8.17□□□□□ -1.1
HLA-DOB-208ENST00000475235 GHRHP01286 108 aa8.17□□□□□ -1.1
HLA-DOB-208ENST00000475235 ACYP1P07311 99 aa8.17□□□□□ -1.1
HLA-DOB-208ENST00000475235 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
HLA-DOB-208ENST00000475235 C16orf74Q96GX8 76 aa8.17□□□□□ -1.1
HLA-DOB-208ENST00000475235 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
HLA-DOB-208ENST00000475235 SLC25A2Q9BXI2 301 aa8.16□□□□□ -1.1
HLA-DOB-208ENST00000475235 VPS13DQ5THJ4 4388 aa8.16□□□□□ -1.1
HLA-DOB-208ENST00000475235 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 HTN1P15515 57 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 HTN3P15516 51 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 NPC2P61916 151 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 Q6ZQT7 251 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 MIR17HGQ75NE6 70 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 FAM167A-AS1Q96KT0 104 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 OTORQ9NRC9 128 aa8.15□□□□□ -1.1
HLA-DOB-208ENST00000475235 TRAV8-4A0A0B4J246 113 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 H3BT86 120 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 M0R3E3 92 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 PRM2P04554 102 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 TIMM8BQ9Y5J9 83 aaPredicted RBP8.14□□□□□ -1.11
HLA-DOB-208ENST00000475235 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 DAZ2Q13117 558 aaKnown RBP8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 FAM19A2Q8N3H0 131 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 DEFB130BP0DP73 79 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 DEFB130AP0DP74 79 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 FXYD5Q96DB9 178 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 KMT2AQ03164 3969 aa8.13□□□□□ -1.11
HLA-DOB-208ENST00000475235 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
HLA-DOB-208ENST00000475235 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
HLA-DOB-208ENST00000475235 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
HLA-DOB-208ENST00000475235 KLLNB2CW77 178 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 TCL1BO95988 128 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 UBE2L3P68036 154 aaKnown RBP8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 ERCC8Q13216 396 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 TMEM170BQ5T4T1 132 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 ZC2HC1BQ5TFG8 222 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 NOP10Q9NPE3 64 aaKnown RBP8.11□□□□□ -1.11
HLA-DOB-208ENST00000475235 HIST1H4AP62805 103 aaKnown RBP8.1□□□□□ -1.11
HLA-DOB-208ENST00000475235 IGKV2-40A0A087WW87 121 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms