RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 GNRH2O43555 120 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 J3QLI3 93 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 IGHV4-59P01825 116 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 A0A087WYN8 130 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 IGHV3-21A0A0B4J1V1 117 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 TRBV7-6A0A0J9YX20 115 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 OXLD1Q5BKU9 147 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 DYNLRB1Q9NP97 96 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 PLAC8Q9NZF1 115 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 Q9UF83 564 aa2.86□□□□□ -1.95
USP16-205ENST00000474835 ZDBF2Q9HCK1 2354 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 ANKRD11Q6UB99 2663 aaPredicted RBP2.85□□□□□ -1.95
USP16-205ENST00000474835 IGHV3-35A0A0C4DH35 117 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 USP17L23D6RBM5 183 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 APELAP0DMC3 54 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 IGHV4-30-4P0DP06 118 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 RS1O15537 224 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 Q1T7F1 81 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 HIST2H2BCQ6DN03 193 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 HIST2H2BDQ6DRA6 164 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 Q6ZQT0 140 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 DEFB127Q9H1M4 99 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 SPTA1P02549 2419 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 TRAV8-3A0A0A6YYJ7 113 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
USP16-205ENST00000474835 PRSS2P07478 247 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 XCL1P47992 114 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 CXCL6P80162 114 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 GAGE2AQ6NT46 116 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 Q8NDZ9 215 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 DPM3Q9P2X0 92 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 XCL2Q9UBD3 114 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 WNK2Q9Y3S1 2297 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 NF1P21359 2839 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 DNAH9Q9NYC9 4486 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 GVINP1Q7Z2Y8 2422 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 TRAV7A0A075B6U4 112 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 IGHV4-28A0A0C4DH34 117 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 RBMY1BA6NDE4 496 aaKnown RBP2.84□□□□□ -1.95
USP16-205ENST00000474835 RBMY1EA6NEQ0 496 aaKnown RBP2.84□□□□□ -1.95
USP16-205ENST00000474835 NDUFB3O43676 98 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 SLPIP03973 132 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 RBMY1DP0C7P1 496 aaKnown RBP2.84□□□□□ -1.95
USP16-205ENST00000474835 NTM-AS1Q6ZSK4 140 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 DSCR8Q96T75 97 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 Q9H8V8 135 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 MXRA5Q9NR99 2828 aa2.84□□□□□ -1.95
USP16-205ENST00000474835 PLAC8L1A1L4L8 177 aa2.84□□□□□ -1.96
USP16-205ENST00000474835 TRBV12-3P01733 135 aa2.84□□□□□ -1.96
USP16-205ENST00000474835 IGHV3-53P01767 116 aa2.84□□□□□ -1.96
USP16-205ENST00000474835 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.96
USP16-205ENST00000474835 CDSNQ15517 529 aa2.84□□□□□ -1.96
USP16-205ENST00000474835 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.96
USP16-205ENST00000474835 K7EQG2 157 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 CCL21O00585 134 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 FDCSPQ8NFU4 85 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 IGHV3-72A0A0B4J1Y9 119 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 TRAV13-2A0A0B4J235 113 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 TMEM89A2RUT3 159 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 A8MZ25 164 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 LGALS3P17931 250 aaKnown RBP2.83□□□□□ -1.96
USP16-205ENST00000474835 PFN2P35080 140 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 BSPH1Q075Z2 132 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 C15orf32Q32M92 178 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 HRCT1Q6UXD1 115 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 IGHV3-38A0A0C4DH36 116 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 FAM27E3Q08E93 113 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 CCL17Q92583 94 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 OVOL2Q9BRP0 275 aa2.83□□□□□ -1.96
USP16-205ENST00000474835 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
USP16-205ENST00000474835 PATE3B3GLJ2 98 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 ATP6V0E1O15342 81 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 ZFP36P26651 326 aaKnown RBP2.82□□□□□ -1.96
USP16-205ENST00000474835 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 LINC00612Q8N6U2 182 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 PTPRZ1P23471 2315 aaPredicted RBP2.82□□□□□ -1.96
USP16-205ENST00000474835 BDP1A6H8Y1 2624 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 CACNA1HO95180 2353 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 TRAV41A0A0B4J266 112 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 IGHV4-39P01824 125 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 BAALC-AS2P0C853 105 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 DEFB114Q30KQ6 69 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 SMIM11BQ8TCY0 68 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 CDC42SE2Q9NRR3 84 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 TRAV13-1A0A0B4J241 112 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 M0R1B8 84 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 ATP1A1-AS1Q5TC04 95 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
USP16-205ENST00000474835 IGHV1OR15-1A0A075B7D0 117 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 IGHV4-61A0A0C4DH41 118 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 CSNK1G2-AS1Q8NCQ2 148 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 APCP25054 2843 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 PTPRQQ9UMZ3 2332 aa2.81□□□□□ -1.96
USP16-205ENST00000474835 TENM2Q9NT68 2774 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 762.9 ms