RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ANGP03950 147 aaKnown RBP4.64□□□□□ -1.67
LIMD1-204ENST00000474665 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
LIMD1-204ENST00000474665 WFDC2Q14508 124 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 CLPSL2Q6UWE3 100 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 MRPL52Q86TS9 123 aaKnown RBP4.64□□□□□ -1.67
LIMD1-204ENST00000474665 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 C18orf32Q8TCD1 76 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 UBE2WQ96B02 151 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 KIR2DL4Q99706 377 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 OPRPNQ99935 248 aaPredicted RBP4.64□□□□□ -1.67
LIMD1-204ENST00000474665 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 MAP1LC3AQ9H492 121 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 Q9HAA7 133 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
LIMD1-204ENST00000474665 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
LIMD1-204ENST00000474665 H7C423 109 aa4.63□□□□□ -1.67
LIMD1-204ENST00000474665 TRGC2P03986 189 aa4.63□□□□□ -1.67
LIMD1-204ENST00000474665 RAB5AP20339 215 aa4.63□□□□□ -1.67
LIMD1-204ENST00000474665 FCER1GP30273 86 aa4.63□□□□□ -1.67
LIMD1-204ENST00000474665 NXT2Q9NPJ8 142 aaKnown RBP4.63□□□□□ -1.67
LIMD1-204ENST00000474665 CDC42SE2Q9NRR3 84 aa4.63□□□□□ -1.67
LIMD1-204ENST00000474665 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 A0A096LNJ9 63 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 S100A1P23297 94 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 PKIAP61925 76 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 REG3AQ06141 175 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 RNASE13Q5GAN3 156 aaKnown RBP4.62□□□□□ -1.67
LIMD1-204ENST00000474665 RNASEKQ6P5S7 137 aaKnown RBP4.62□□□□□ -1.67
LIMD1-204ENST00000474665 Q6ZUT4 128 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
LIMD1-204ENST00000474665 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
LIMD1-204ENST00000474665 IGLV10-54A0A075B6I4 117 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 TRAV8-3A0A0A6YYJ7 113 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 IGIPA6NJ69 53 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 UBE2L6O14933 153 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 ZNF25P17030 456 aaPredicted RBP4.61□□□□□ -1.67
LIMD1-204ENST00000474665 LINC00310P59036 64 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 AMMECR1LQ6DCA0 310 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 NFE4Q86UQ8 179 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 ZNF664Q8N3J9 261 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 OR5A1Q8NGJ0 315 aa4.61□□□□□ -1.67
LIMD1-204ENST00000474665 IGLV4-3A0A075B6K6 122 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 IGKV2D-24A0A075B6R9 120 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 A0A087WTM6 91 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 K7EMI3 77 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.67
LIMD1-204ENST00000474665 MRPS36P82909 103 aaKnown RBP4.6□□□□□ -1.67
LIMD1-204ENST00000474665 Q0VG73 95 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 MIAQ16674 131 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 C2orf66Q6UXQ4 117 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 LINC00173Q6ZV60 143 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 SPANXA1Q9NS26 97 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 PYGO1Q9Y3Y4 419 aa4.6□□□□□ -1.67
LIMD1-204ENST00000474665 IGKV3OR2-268A0A0C4DH90 116 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 LECT2O14960 151 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 NUPR1O60356 82 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 LINC00614P0C842 121 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 PMCHL1Q16048 86 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 ORMDL2Q53FV1 153 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 BAALCQ8WXS3 180 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
LIMD1-204ENST00000474665 TOMM6Q96B49 74 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 PLA2G2DQ9UNK4 145 aa4.59□□□□□ -1.67
LIMD1-204ENST00000474665 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BKO60814 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 CRPP02741 224 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BJP06899 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BOP23527 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BBP33778 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BDP58876 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BCP62807 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 FOXI1Q12951 378 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST2H2BEQ16778 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.58□□□□□ -1.68
LIMD1-204ENST00000474665 Q5VSD8 79 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 AMELXQ99217 191 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 TM2D2Q9BX73 214 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 CYSLTR1Q9Y271 337 aa4.58□□□□□ -1.68
LIMD1-204ENST00000474665 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 GAGE12HA6NDE8 117 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 CCL25O15444 150 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 SERF1AO75920 110 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 XCL1P47992 114 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 PDZD11Q5EBL8 140 aa4.57□□□□□ -1.68
LIMD1-204ENST00000474665 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 505.3 ms