RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 KMT2AQ03164 3969 aa6.77□□□□□ -1.32
COL8A1-206ENST00000474648 IGIPA6NJ69 53 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 UBE2L6O14933 153 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 LY6G6CO95867 125 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 IGHV3-30P01768 117 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 IGHV3-33P01772 117 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 IGHV3-30-3P0DP02 117 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 IGHV3-30-5P0DP03 117 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
COL8A1-206ENST00000474648 PDZD11Q5EBL8 140 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
COL8A1-206ENST00000474648 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 PYGO1Q9Y3Y4 419 aa6.77□□□□□ -1.33
COL8A1-206ENST00000474648 CSDC2Q9Y534 153 aaKnown RBP6.77□□□□□ -1.33
COL8A1-206ENST00000474648 A0A087WX48 190 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 HSBP1O75506 76 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 HBDP02042 147 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 G0S2P27469 103 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 PKIAP61925 76 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
COL8A1-206ENST00000474648 ZNF25P17030 456 aaPredicted RBP6.75□□□□□ -1.33
COL8A1-206ENST00000474648 AMMECR1LQ6DCA0 310 aa6.75□□□□□ -1.33
COL8A1-206ENST00000474648 SCGB3A1Q96QR1 104 aa6.75□□□□□ -1.33
COL8A1-206ENST00000474648 SPANXA1Q9NS26 97 aa6.75□□□□□ -1.33
COL8A1-206ENST00000474648 KLK12Q9UKR0 248 aa6.75□□□□□ -1.33
COL8A1-206ENST00000474648 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 LCE6AA0A183 80 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
COL8A1-206ENST00000474648 ENHOQ6UWT2 76 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 Q6ZR54 194 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 ERASQ7Z444 233 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 LINC00269Q8N2A0 174 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 OR5A1Q8NGJ0 315 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 TMEM141Q96I45 108 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 TIMM17AQ99595 171 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
COL8A1-206ENST00000474648 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 K7EP13 123 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 ZC2HC1BQ5TFG8 222 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 Q6ZUT4 128 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 AMELXQ99217 191 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
COL8A1-206ENST00000474648 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 TRAV9-2A0A087WT02 112 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 M0R2N4 97 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
COL8A1-206ENST00000474648 NPSP0C0P6 89 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 SNRPEP62304 92 aaKnown RBP6.72□□□□□ -1.33
COL8A1-206ENST00000474648 RNASE13Q5GAN3 156 aaKnown RBP6.72□□□□□ -1.33
COL8A1-206ENST00000474648 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
COL8A1-206ENST00000474648 IFITM10A6NMD0 228 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 ATP5LO75964 103 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 S100A6P06703 90 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 FABP4P15090 132 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 BAALCQ8WXS3 180 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 UBE2WQ96B02 151 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 VCX2Q9H322 139 aa6.71□□□□□ -1.34
COL8A1-206ENST00000474648 RYR3Q15413 4870 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.7□□□□□ -1.34
COL8A1-206ENST00000474648 LEPROTL1O95214 131 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 REG3AQ06141 175 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 CLPSL2Q6UWE3 100 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 IFI27L1Q96BM0 104 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
COL8A1-206ENST00000474648 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
COL8A1-206ENST00000474648 TMA7Q9Y2S6 64 aaKnown RBP6.7□□□□□ -1.34
COL8A1-206ENST00000474648 LINC00959A0A1B0GUT2 108 aa6.69□□□□□ -1.34
COL8A1-206ENST00000474648 PRSS29PA6NIE9 313 aa6.69□□□□□ -1.34
COL8A1-206ENST00000474648 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
COL8A1-206ENST00000474648 PMVKQ15126 192 aa6.69□□□□□ -1.34
COL8A1-206ENST00000474648 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
COL8A1-206ENST00000474648 TRAV8-3A0A0A6YYJ7 113 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 H3BS24 57 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 UBE2D1P51668 147 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 MIAQ16674 131 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 Q6ZN92 141 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 TEX43Q6ZNM6 134 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
COL8A1-206ENST00000474648 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
COL8A1-206ENST00000474648 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
COL8A1-206ENST00000474648 TRAV8-4A0A0B4J246 113 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms