RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 H7C423 109 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 MRPS36P82909 103 aaKnown RBP13.85□□□□□ -0.19
SSR1-204ENST00000474597 C12orf74Q32Q52 190 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 VSIG2Q96IQ7 327 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
SSR1-204ENST00000474597 MRAPQ8TCY5 172 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 FAM104AQ969W3 186 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 TMEM101Q96IK0 257 aa13.85□□□□□ -0.19
SSR1-204ENST00000474597 CSDC2Q9Y534 153 aaKnown RBP13.85□□□□□ -0.19
SSR1-204ENST00000474597 A0A0J9YWU9 116 aa13.84□□□□□ -0.19
SSR1-204ENST00000474597 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
SSR1-204ENST00000474597 A0A096LPF7 62 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 CHCHD5Q9BSY4 110 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 CHAC1Q9BUX1 264 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 HERVK_113P61574 105 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 CTAG1AP78358 180 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 NFE4Q86UQ8 179 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 LURAP1LQ8IV03 231 aa13.83□□□□□ -0.2
SSR1-204ENST00000474597 A0A0J9YXV3 536 aa13.82□□□□□ -0.2
SSR1-204ENST00000474597 TP73-AS1Q9UF72 201 aa13.82□□□□□ -0.2
SSR1-204ENST00000474597 IGKV2D-26A0A0A0MRZ7 120 aa13.81□□□□□ -0.2
SSR1-204ENST00000474597 GAGE6Q13070 117 aa13.81□□□□□ -0.2
SSR1-204ENST00000474597 ZNF25P17030 456 aaPredicted RBP13.8□□□□□ -0.2
SSR1-204ENST00000474597 MRPL23Q16540 153 aaKnown RBP13.8□□□□□ -0.2
SSR1-204ENST00000474597 PCP2Q8IVA1 136 aa13.8□□□□□ -0.2
SSR1-204ENST00000474597 TM2D3Q9BRN9 247 aa13.8□□□□□ -0.2
SSR1-204ENST00000474597 ICOSQ9Y6W8 199 aa13.8□□□□□ -0.2
SSR1-204ENST00000474597 BOD1L2Q8IYS8 172 aa13.8□□□□□ -0.2
SSR1-204ENST00000474597 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
SSR1-204ENST00000474597 SH2D6Q7Z4S9 175 aa13.79□□□□□ -0.2
SSR1-204ENST00000474597 C11orf45Q8TAV5 145 aa13.79□□□□□ -0.2
SSR1-204ENST00000474597 TRAV8-6A0A0B4J262 113 aa13.78□□□□□ -0.2
SSR1-204ENST00000474597 E9PLD3 99 aa13.78□□□□□ -0.2
SSR1-204ENST00000474597 DLEU1O43261 78 aa13.78□□□□□ -0.2
SSR1-204ENST00000474597 Q6ZTC4 211 aa13.78□□□□□ -0.2
SSR1-204ENST00000474597 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
SSR1-204ENST00000474597 NOTCH1P46531 2555 aa13.77□□□□□ -0.2
SSR1-204ENST00000474597 M0R143 59 aa13.77□□□□□ -0.21
SSR1-204ENST00000474597 TINCRA0A1B0GVN0 87 aa13.76□□□□□ -0.21
SSR1-204ENST00000474597 ZNF22P17026 224 aaPredicted RBP13.76□□□□□ -0.21
SSR1-204ENST00000474597 UBE2D1P51668 147 aa13.76□□□□□ -0.21
SSR1-204ENST00000474597 GEMIN7Q9H840 131 aaKnown RBP13.76□□□□□ -0.21
SSR1-204ENST00000474597 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
SSR1-204ENST00000474597 TTTY13Q9BZ97 58 aa13.76□□□□□ -0.21
SSR1-204ENST00000474597 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
SSR1-204ENST00000474597 SEC11AP67812 179 aa13.74□□□□□ -0.21
SSR1-204ENST00000474597 TRAV13-1A0A0B4J241 112 aa13.74□□□□□ -0.21
SSR1-204ENST00000474597 TMEM223A0PJW6 202 aa13.74□□□□□ -0.21
SSR1-204ENST00000474597 SIVA1O15304 175 aa13.74□□□□□ -0.21
SSR1-204ENST00000474597 SNHG12Q9BXW3 62 aa13.74□□□□□ -0.21
SSR1-204ENST00000474597 H3BNG1 76 aa13.73□□□□□ -0.21
SSR1-204ENST00000474597 BATFQ16520 125 aa13.73□□□□□ -0.21
SSR1-204ENST00000474597 C2orf91Q6ZV80 131 aa13.73□□□□□ -0.21
SSR1-204ENST00000474597 LINC00469Q8N7U9 141 aa13.73□□□□□ -0.21
SSR1-204ENST00000474597 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.21
SSR1-204ENST00000474597 EREGO14944 169 aa13.71□□□□□ -0.21
SSR1-204ENST00000474597 TIRAPP58753 221 aa13.71□□□□□ -0.21
SSR1-204ENST00000474597 DEFB131BA0A096LNP1 70 aa13.71□□□□□ -0.22
SSR1-204ENST00000474597 MYMXA0A1B0GTQ4 84 aa13.71□□□□□ -0.22
SSR1-204ENST00000474597 HERVK_113P63121 156 aa13.71□□□□□ -0.22
SSR1-204ENST00000474597 MAPKAPK5-AS1Q8N8E1 139 aa13.71□□□□□ -0.22
SSR1-204ENST00000474597 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
SSR1-204ENST00000474597 MGAM2Q2M2H8 2515 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 IGHV3-64A0A075B6Q5 118 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 H3BRM9 83 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 LEPROTO15243 131 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 LELP1Q5T871 98 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 NBEAL1Q6ZS30 2694 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 IGKV3OR2-268A0A0C4DH90 116 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 LGALS3P17931 250 aaKnown RBP13.69□□□□□ -0.22
SSR1-204ENST00000474597 LINC00242Q5T6M2 205 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
SSR1-204ENST00000474597 RBX1P62877 108 aa13.68□□□□□ -0.22
SSR1-204ENST00000474597 LBHQ53QV2 105 aaPredicted RBP13.68□□□□□ -0.22
SSR1-204ENST00000474597 MPV17L2Q567V2 206 aa13.68□□□□□ -0.22
SSR1-204ENST00000474597 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
SSR1-204ENST00000474597 J3QQQ9 107 aa13.67□□□□□ -0.22
SSR1-204ENST00000474597 COX6A2Q02221 97 aa13.67□□□□□ -0.22
SSR1-204ENST00000474597 HIGD1BQ9P298 99 aa13.67□□□□□ -0.22
SSR1-204ENST00000474597 CDKN2A-AS1Q9UH64 79 aa13.67□□□□□ -0.22
SSR1-204ENST00000474597 IGLV5-45A0A087WSX0 123 aa13.66□□□□□ -0.22
SSR1-204ENST00000474597 TRAV10A0A0B4J240 114 aa13.65□□□□□ -0.22
SSR1-204ENST00000474597 SPINK8P0C7L1 97 aa13.65□□□□□ -0.22
SSR1-204ENST00000474597 LYPD5Q6UWN5 251 aa13.65□□□□□ -0.22
SSR1-204ENST00000474597 IGHV1-58A0A0C4DH39 117 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 TSPEAR-AS2P59090 65 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 HSD52Q0P140 79 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 SCGB1D4Q6XE38 83 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 IGHV3-30-3P0DP02 117 aa13.64□□□□□ -0.23
SSR1-204ENST00000474597 TENM3Q9P273 2699 aa13.63□□□□□ -0.23
SSR1-204ENST00000474597 ANGP03950 147 aaKnown RBP13.62□□□□□ -0.23
SSR1-204ENST00000474597 BVES-AS1Q5T3Y7 98 aa13.62□□□□□ -0.23
SSR1-204ENST00000474597 LINC00959A0A1B0GUT2 108 aa13.6□□□□□ -0.23
SSR1-204ENST00000474597 SS18Q15532 418 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms