RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SAMD5Q5TGI4 173 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 A0A0J9YY99 117 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 A8MZ25 164 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 E9PLD3 99 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 MDFIQ99750 246 aa12.61□□□□□ -0.39
VARS2-206ENST00000473916 A0A096LPF7 62 aa12.6□□□□□ -0.39
VARS2-206ENST00000473916 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
VARS2-206ENST00000473916 LBHQ53QV2 105 aaPredicted RBP12.6□□□□□ -0.39
VARS2-206ENST00000473916 PAPPA-AS1Q5QFB9 102 aa12.6□□□□□ -0.39
VARS2-206ENST00000473916 GTSF1LQ9H1H1 148 aa12.6□□□□□ -0.39
VARS2-206ENST00000473916 TSPEAR-AS2P59090 65 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 PRO0255Q9UI72 69 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
VARS2-206ENST00000473916 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
VARS2-206ENST00000473916 TMEM97Q5BJF2 176 aa12.58□□□□□ -0.4
VARS2-206ENST00000473916 DGAT2L7PQ6IED9 249 aa12.58□□□□□ -0.4
VARS2-206ENST00000473916 TIMM21Q9BVV7 248 aa12.58□□□□□ -0.4
VARS2-206ENST00000473916 NPSP0C0P6 89 aa12.57□□□□□ -0.4
VARS2-206ENST00000473916 SPART-AS1P0CW21 52 aa12.57□□□□□ -0.4
VARS2-206ENST00000473916 HTN3P15516 51 aa12.57□□□□□ -0.4
VARS2-206ENST00000473916 PAX4O43316 350 aa12.57□□□□□ -0.4
VARS2-206ENST00000473916 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
VARS2-206ENST00000473916 GAGE6Q13070 117 aa12.57□□□□□ -0.4
VARS2-206ENST00000473916 MGAM2Q2M2H8 2515 aa12.56□□□□□ -0.4
VARS2-206ENST00000473916 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
VARS2-206ENST00000473916 TMEM223A0PJW6 202 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 SIVA1O15304 175 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 UBE2D1P51668 147 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 Q6ZVH6 145 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 ATP6V0E2Q8NHE4 81 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 TRAV26-1A0A087WT03 109 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 MYMXA0A1B0GTQ4 84 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 UBE2L6O14933 153 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 ATP5G1P05496 136 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 COL5A1-AS1Q5SY13 56 aa12.55□□□□□ -0.4
VARS2-206ENST00000473916 F5H768 121 aa12.54□□□□□ -0.4
VARS2-206ENST00000473916 HERVK_113P61574 105 aa12.54□□□□□ -0.4
VARS2-206ENST00000473916 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
VARS2-206ENST00000473916 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
VARS2-206ENST00000473916 CDC42SE2Q9NRR3 84 aa12.54□□□□□ -0.4
VARS2-206ENST00000473916 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
VARS2-206ENST00000473916 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
VARS2-206ENST00000473916 OR5A1Q8NGJ0 315 aa12.53□□□□□ -0.4
VARS2-206ENST00000473916 CHCHD5Q9BSY4 110 aa12.53□□□□□ -0.4
VARS2-206ENST00000473916 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
VARS2-206ENST00000473916 IGLV4-60A0A075B6I1 120 aa12.52□□□□□ -0.4
VARS2-206ENST00000473916 TINCRA0A1B0GVN0 87 aa12.52□□□□□ -0.4
VARS2-206ENST00000473916 COX6A2Q02221 97 aa12.52□□□□□ -0.4
VARS2-206ENST00000473916 C12orf74Q32Q52 190 aa12.52□□□□□ -0.4
VARS2-206ENST00000473916 TRAV8-3A0A0A6YYJ7 113 aa12.52□□□□□ -0.41
VARS2-206ENST00000473916 TRAV13-1A0A0B4J241 112 aa12.52□□□□□ -0.41
VARS2-206ENST00000473916 HIGD1BQ9P298 99 aa12.52□□□□□ -0.41
VARS2-206ENST00000473916 K7EP13 123 aa12.51□□□□□ -0.41
VARS2-206ENST00000473916 HSD52Q0P140 79 aa12.51□□□□□ -0.41
VARS2-206ENST00000473916 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
VARS2-206ENST00000473916 J3QQQ9 107 aa12.5□□□□□ -0.41
VARS2-206ENST00000473916 K7EIL1 84 aa12.5□□□□□ -0.41
VARS2-206ENST00000473916 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
VARS2-206ENST00000473916 CDKN2A-AS1Q9UH64 79 aa12.5□□□□□ -0.41
VARS2-206ENST00000473916 LEPROTO15243 131 aa12.49□□□□□ -0.41
VARS2-206ENST00000473916 TMEM101Q96IK0 257 aa12.49□□□□□ -0.41
VARS2-206ENST00000473916 GEMIN7Q9H840 131 aaKnown RBP12.49□□□□□ -0.41
VARS2-206ENST00000473916 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
VARS2-206ENST00000473916 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
VARS2-206ENST00000473916 H7C423 109 aa12.47□□□□□ -0.41
VARS2-206ENST00000473916 IGHV3-30-3P0DP02 117 aa12.47□□□□□ -0.41
VARS2-206ENST00000473916 GCSHP23434 173 aa12.47□□□□□ -0.41
VARS2-206ENST00000473916 FXYD2P54710 66 aa12.47□□□□□ -0.41
VARS2-206ENST00000473916 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
VARS2-206ENST00000473916 ORAOV1Q8WV07 137 aa12.47□□□□□ -0.41
VARS2-206ENST00000473916 SCGB1D4Q6XE38 83 aa12.46□□□□□ -0.41
VARS2-206ENST00000473916 Q6ZTC4 211 aa12.46□□□□□ -0.41
VARS2-206ENST00000473916 Q8N3U1 123 aa12.46□□□□□ -0.41
VARS2-206ENST00000473916 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
VARS2-206ENST00000473916 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
VARS2-206ENST00000473916 TIRAPP58753 221 aa12.45□□□□□ -0.42
VARS2-206ENST00000473916 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
VARS2-206ENST00000473916 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 TAX1BP3O14907 124 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 SMAGPQ0VAQ4 97 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 IGHV1-58A0A0C4DH39 117 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 DEFB121Q5J5C9 76 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 CEND1Q8N111 149 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 HIST1H4GQ99525 98 aa12.44□□□□□ -0.42
VARS2-206ENST00000473916 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
VARS2-206ENST00000473916 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
VARS2-206ENST00000473916 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
VARS2-206ENST00000473916 FAM19A3Q7Z5A8 133 aa12.43□□□□□ -0.42
VARS2-206ENST00000473916 RBX1P62877 108 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 HERVK_113P63121 156 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 SEC11AP67812 179 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 C10orf126Q8N4M7 172 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 ICOSQ9Y6W8 199 aa12.42□□□□□ -0.42
VARS2-206ENST00000473916 MRPL23Q16540 153 aaKnown RBP12.41□□□□□ -0.42
VARS2-206ENST00000473916 KPRPQ5T749 579 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms