RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PLXNB1O43157 2135 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 NCR3O14931 201 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 UBE2L6O14933 153 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 CRPP02741 224 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 UNQ9165/PRO28630Q6UXU0 137 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 RNF5Q99942 180 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 A0A087WZ39 114 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 CXCL6P80162 114 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 DEFB133Q30KQ1 61 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 Q6ZTC4 211 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 MIR7-3HGQ8N6C7 128 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 MALRD1Q5VYJ5 2156 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 A0A087WYN8 130 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 PHF5AQ7RTV0 110 aaKnown RBP3.63□□□□□ -1.83
TMEM39A-206ENST00000473684 TRAV10A0A0B4J240 114 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 IGKV3-15P01624 115 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 NREPQ16612 68 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 Q6ZRP5 223 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 Q8N6K4 173 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 LINC01560Q8TB33 94 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 DNAJC9-AS1A6NH13 148 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 C8orf87E5RJ46 101 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 RNASE3P12724 160 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-206ENST00000473684 BDP1A6H8Y1 2624 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 IGLV11-55A0A075B6I3 123 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 LECT2O14960 151 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 PRR9Q5T870 116 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 ARHGAP32A7KAX9 2087 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 PRR14LQ5THK1 2151 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 ZFAND2AQ8N6M9 145 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 Q9H8V8 135 aa3.61□□□□□ -1.83
TMEM39A-206ENST00000473684 K7EMT4 169 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 M0QY20 66 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 UBE2AP49459 152 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 IGLV5-37A0A075B6J1 123 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 PINLYPA6NC86 204 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 IGHV1-2P23083 117 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 CLEC19AQ6UXS0 136 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 C11orf72Q8NBR9 251 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 SMIM11BQ8TCY0 68 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 IGHV3-72A0A0B4J1Y9 119 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 CCL3L1P16619 93 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 SYCNQ0VAF6 134 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 SDK2Q58EX2 2172 aa3.6□□□□□ -1.83
TMEM39A-206ENST00000473684 IGLV1-44P01699 117 aa3.59□□□□□ -1.83
TMEM39A-206ENST00000473684 CADP27708 2225 aa3.59□□□□□ -1.83
TMEM39A-206ENST00000473684 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 ECSCRQ19T08 205 aa3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 LCA10Q71F78 164 aa3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 LINC00337Q8N6G1 96 aa3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 DEFB108BQ8NET1 73 aa3.59□□□□□ -1.84
TMEM39A-206ENST00000473684 ABCA1O95477 2261 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 PDE6GP18545 87 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 C7orf65Q6ZTY9 151 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 DEFB104AQ8WTQ1 72 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 CLPSL1A2RUU4 121 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 J3QKU1 62 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 BPY2O14599 106 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 PSPHP1O15172 72 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 GNRH2O43555 120 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 LINC00269Q8N2A0 174 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 ITLN2Q8WWU7 325 aaPredicted RBP3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 PLCE1Q9P212 2302 aa3.58□□□□□ -1.84
TMEM39A-206ENST00000473684 HAMPP81172 84 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 IGFL3Q6UXB1 125 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 DIRC1Q969H9 104 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 KNL1Q8NG31 2342 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 IGKV2-28A0A075B6P5 120 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 A6NN06 94 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 IGKV2D-28P01615 120 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV1-8P0DP01 117 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 Q6ZQT0 140 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 SND1-IT1Q9HBX3 110 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 S4R3C0 116 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 FAM19A3Q7Z5A8 133 aa3.57□□□□□ -1.84
TMEM39A-206ENST00000473684 IGLV3-9A0A075B6K5 115 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 IGLV1-47P01700 117 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 C9orf106Q8NAJ2 232 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 TTTY12Q9BZ98 90 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 ARRDC1-AS1Q9H2J1 176 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 TRBV10-1A0A0K0K1A3 114 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms