RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
CKS1B-205ENST00000473344 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
CKS1B-205ENST00000473344 FAT1Q14517 4588 aa4.84□□□□□ -1.63
CKS1B-205ENST00000473344 MUC4Q99102 2169 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 IGKV1D-37A0A075B6S9 117 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 TRAV12-2A0A075B6T6 113 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 TRAV5A0A0B4J249 113 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 EPM2AB3EWF7 344 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 B5MCH6 92 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 ORM2P19652 201 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 AMTNQ6UX39 209 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 LYPD1Q8N2G4 141 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 OR13C6PQ8NH95 151 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 C16orf74Q96GX8 76 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 PRELID3AQ96N28 172 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 TRGV9Q99603 122 aa4.83□□□□□ -1.64
CKS1B-205ENST00000473344 SLC25A39Q9BZJ4 359 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-205ENST00000473344 TIMM8BQ9Y5J9 83 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-205ENST00000473344 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 A8MTW9 85 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 FCER1GP30273 86 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
CKS1B-205ENST00000473344 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 IGFL4Q6B9Z1 124 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 SMIM20Q8N5G0 67 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 RNF182Q8N6D2 247 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 PTH2Q96A98 100 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 LINC00479Q96M42 142 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 Q9H3A6 140 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 PRO0461Q9UI25 63 aa4.82□□□□□ -1.64
CKS1B-205ENST00000473344 IGKV1OR2-108A0A075B7D4 117 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 PLAC8L1A1L4L8 177 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 PGPA6NDG6 321 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 LINC01546A6NGU7 62 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 K7EMI3 77 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 SNAI2O43623 268 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 PRSS1P07477 247 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 FXYD2P54710 66 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 SH2D6Q7Z4S9 175 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 TMEM75Q8N9X5 138 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 FAM167A-AS1Q96KT0 104 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 TPPP3Q9BW30 176 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 IMUPQ9GZP8 106 aa4.81□□□□□ -1.64
CKS1B-205ENST00000473344 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
CKS1B-205ENST00000473344 A0A0J9YY99 117 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 MYMXA0A1B0GTQ4 84 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 A0A1B0GX51 115 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 NPYP01303 97 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 MT-ATP8P03928 68 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 TCRAP04437 139 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 INAFM2P0DMQ5 153 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 RPL7P18124 248 aaKnown RBP4.8□□□□□ -1.64
CKS1B-205ENST00000473344 FAM104BQ5XKR9 115 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
CKS1B-205ENST00000473344 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 UPK3BQ9BT76 320 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 TMEM14CQ9P0S9 112 aa4.8□□□□□ -1.64
CKS1B-205ENST00000473344 NACAE9PAV3 2078 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 TRAV8-2A0A0B4J237 113 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 ACYP1P07311 99 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 CKS2P33552 79 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 IFI27P40305 119 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-205ENST00000473344 XGP55808 180 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 HERVK_113P61574 105 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
CKS1B-205ENST00000473344 ESRGQ1W209 222 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 Q86TA4 180 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 FXYD5Q96DB9 178 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 LINC01600Q96MT4 127 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
CKS1B-205ENST00000473344 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 HIGD1AQ9Y241 93 aa4.79□□□□□ -1.64
CKS1B-205ENST00000473344 H3BNG1 76 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 H3BRN7 92 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 H7C1H1 209 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 J3KT08 172 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 RPL13AP40429 203 aaKnown RBP4.78□□□□□ -1.64
CKS1B-205ENST00000473344 PSMB2P49721 201 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 LINC00315P59091 139 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 ODF1Q14990 250 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 PMVKQ15126 192 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 TMEM78Q5T7P6 136 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 LINC00305Q7Z4B0 112 aa4.78□□□□□ -1.64
CKS1B-205ENST00000473344 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms