RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR51A4Q8NGJ6 313 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 PROK2Q9HC23 129 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 C19orf12Q9NSK7 152 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 PTPRGP23470 1445 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 ABCC3O15438 1527 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 MYO3AQ8NEV4 1616 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 IQGAP1P46940 1657 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 ZNF142P52746 1687 aaPredicted RBP-0.24□□□□□ -2.45
CLK1-209ENST00000472679 MUC22E2RYF6 1773 aaPredicted RBP-0.24□□□□□ -2.45
CLK1-209ENST00000472679 SCN11AQ9UI33 1791 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 ZNF236Q9UL36 1845 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 A0A1W2PRE2 83 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 H3BMG7 143 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 TPST1O60507 370 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 MT1EP04732 61 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 IL7P13232 177 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 GNG10P50151 68 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 BLCAPP62952 87 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 DEFA5Q01523 94 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 INSL4Q14641 139 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 SMIM5Q71RC9 77 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 CCDC32Q9BV29 185 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 CLIP1P30622 1438 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 CASKIN1Q8WXD9 1431 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 NSD3Q9BZ95 1437 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 URB2Q14146 1524 aaKnown RBP-0.24□□□□□ -2.45
CLK1-209ENST00000472679 ABCA8O94911 1581 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 SCRIBQ14160 1630 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 TANC1Q9C0D5 1861 aa-0.24□□□□□ -2.45
CLK1-209ENST00000472679 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.25□□□□□ -2.45
CLK1-209ENST00000472679 TMEM189A5PLL7 270 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 IFITM5A6NNB3 132 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 TFF1P04155 84 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 MT1AP04731 61 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 CRYGSP22914 178 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 LXNQ9BS40 222 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 MED31Q9Y3C7 131 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 PRG4Q92954 1404 aaPredicted RBP-0.25□□□□□ -2.45
CLK1-209ENST00000472679 SCAPERQ9BY12 1400 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 NCOA2Q15596 1464 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 AGLP35573 1532 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 TIAM2Q8IVF5 1701 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 PLXNA1Q9UIW2 1896 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
CLK1-209ENST00000472679 SIPA1L3O60292 1781 aaPredicted RBP-0.26□□□□□ -2.45
CLK1-209ENST00000472679 LRRIQ1Q96JM4 1722 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 TOGARAM1Q9Y4F4 1720 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 C5P01031 1676 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 ALS2Q96Q42 1657 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 DEPDC5O75140 1603 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 PLXNC1O60486 1568 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 CDC42BPGQ6DT37 1551 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 ABCC6O95255 1503 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 ROCK1Q13464 1354 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 TRBV7-6A0A0J9YX20 115 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 RPS29P62273 56 aaKnown RBP-0.26□□□□□ -2.45
CLK1-209ENST00000472679 UBA52P62987 128 aaKnown RBP-0.26□□□□□ -2.45
CLK1-209ENST00000472679 MT1XP80297 61 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 IQCJQ1A5X6 159 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 PPP1R2P3Q6NXS1 205 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 WFDC9Q8NEX5 89 aa-0.26□□□□□ -2.45
CLK1-209ENST00000472679 QSER1Q2KHR3 1735 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 NRXN2Q9P2S2 1712 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 LMO7Q8WWI1 1683 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 CLTCL1P53675 1640 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 MROH1Q8NDA8 1641 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 ARHGAP5Q13017 1502 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 ERICH3Q5RHP9 1530 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 NLRP1Q9C000 1473 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 OVOS2A0A0G2JMS6 1433 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 OVOS2A0A0J9YW53 1432 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 OVOS2Q6IE36 1432 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 CPDO75976 1380 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 TMEM2Q9UHN6 1383 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 E5RI56 91 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 TFAMQ00059 246 aaKnown RBP-0.27□□□□□ -2.45
CLK1-209ENST00000472679 OR4S1Q8NGB4 309 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 DMAC1Q96GE9 116 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 CBLN4Q9NTU7 201 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 TRAPPC2LQ9UL33 140 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 APLNQ9ULZ1 77 aa-0.27□□□□□ -2.45
CLK1-209ENST00000472679 SAMD9LQ8IVG5 1584 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 INO80Q9ULG1 1556 aaPredicted RBP-0.28□□□□□ -2.45
CLK1-209ENST00000472679 CNTLNQ9NXG0 1405 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 A0A096LNT2 108 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 A0A0G2JMM0 328 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 LOC107984640A0A0U1RRK4 108 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 CLPSL1A2RUU4 121 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 M0QZK8 103 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 KLKP1Q107X0 134 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 RHOHQ15669 191 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 THEM6Q8WUY1 208 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 SMIM7Q9BQ49 75 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 PCBD2Q9H0N5 130 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 TMEM14BQ9NUH8 114 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 RGPD3A6NKT7 1758 aaPredicted RBP-0.28□□□□□ -2.45
CLK1-209ENST00000472679 RGPD4Q7Z3J3 1758 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 XRN1Q8IZH2 1706 aaKnown RBP-0.28□□□□□ -2.45
CLK1-209ENST00000472679 PI4KAP42356 2102 aa-0.28□□□□□ -2.45
CLK1-209ENST00000472679 IFT140Q96RY7 1462 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms