RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 ZFAND6Q6FIF0 208 aa12.59□□□□□ -0.39
RRP1-202ENST00000471909 EIF4EBP3O60516 100 aaPredicted RBP12.59□□□□□ -0.39
RRP1-202ENST00000471909 RNF183Q96D59 192 aa12.59□□□□□ -0.39
RRP1-202ENST00000471909 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 ANAPC13Q9BS18 74 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 P0DMU3 169 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 Q1RN00 199 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
RRP1-202ENST00000471909 C1orf158Q8N1D5 194 aa12.57□□□□□ -0.4
RRP1-202ENST00000471909 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.57□□□□□ -0.4
RRP1-202ENST00000471909 RHODO00212 210 aa12.57□□□□□ -0.4
RRP1-202ENST00000471909 ZNF22P17026 224 aaPredicted RBP12.57□□□□□ -0.4
RRP1-202ENST00000471909 I3L3M4 83 aa12.56□□□□□ -0.4
RRP1-202ENST00000471909 IGLV1-51P01701 117 aa12.56□□□□□ -0.4
RRP1-202ENST00000471909 ATXN8Q156A1 80 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 Q6ZSN1 163 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 KRTAP10-3P60369 221 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 CITED1Q99966 193 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 SPXQ9BT56 116 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 Q9UF83 564 aa12.55□□□□□ -0.4
RRP1-202ENST00000471909 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
RRP1-202ENST00000471909 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
RRP1-202ENST00000471909 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
RRP1-202ENST00000471909 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
RRP1-202ENST00000471909 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
RRP1-202ENST00000471909 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
RRP1-202ENST00000471909 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.4
RRP1-202ENST00000471909 A0A0J9YXY3 114 aa12.52□□□□□ -0.4
RRP1-202ENST00000471909 SNCGO76070 127 aa12.52□□□□□ -0.41
RRP1-202ENST00000471909 SHISA2Q6UWI4 295 aa12.52□□□□□ -0.41
RRP1-202ENST00000471909 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.41
RRP1-202ENST00000471909 NACAE9PAV3 2078 aa12.52□□□□□ -0.41
RRP1-202ENST00000471909 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
RRP1-202ENST00000471909 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
RRP1-202ENST00000471909 IL17DQ8TAD2 202 aa12.51□□□□□ -0.41
RRP1-202ENST00000471909 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
RRP1-202ENST00000471909 RS1O15537 224 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 GAGE2BQ13066 116 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 GAGE2EQ4V326 116 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 GAGE2DQ9UEU5 116 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
RRP1-202ENST00000471909 TRBV30A0A0K0K1B3 111 aa12.49□□□□□ -0.41
RRP1-202ENST00000471909 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
RRP1-202ENST00000471909 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
RRP1-202ENST00000471909 TRIAP1O43715 76 aa12.49□□□□□ -0.41
RRP1-202ENST00000471909 TRBV10-2A0A0K0K1G8 114 aa12.48□□□□□ -0.41
RRP1-202ENST00000471909 GAGE5Q13069 117 aa12.48□□□□□ -0.41
RRP1-202ENST00000471909 GAGE6Q13070 117 aa12.48□□□□□ -0.41
RRP1-202ENST00000471909 PRSS2P07478 247 aa12.48□□□□□ -0.41
RRP1-202ENST00000471909 RPL13AP40429 203 aaKnown RBP12.48□□□□□ -0.41
RRP1-202ENST00000471909 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
RRP1-202ENST00000471909 TEX49A0A1B0GTD5 131 aa12.47□□□□□ -0.41
RRP1-202ENST00000471909 LINC01600Q96MT4 127 aa12.47□□□□□ -0.41
RRP1-202ENST00000471909 NSD1Q96L73 2696 aaPredicted RBP12.47□□□□□ -0.41
RRP1-202ENST00000471909 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
RRP1-202ENST00000471909 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
RRP1-202ENST00000471909 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
RRP1-202ENST00000471909 UBE2WQ96B02 151 aa12.46□□□□□ -0.41
RRP1-202ENST00000471909 LITAFQ99732 161 aa12.46□□□□□ -0.41
RRP1-202ENST00000471909 CRLF1O75462 422 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 ICOSQ9Y6W8 199 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
RRP1-202ENST00000471909 NDUFV3P56181 108 aaKnown RBP12.45□□□□□ -0.42
RRP1-202ENST00000471909 MRPS36P82909 103 aaKnown RBP12.45□□□□□ -0.42
RRP1-202ENST00000471909 Q6ZTI0 123 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 LINC00482Q8N8I6 264 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 SS18L2Q9UHA2 77 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 PYGO1Q9Y3Y4 419 aa12.45□□□□□ -0.42
RRP1-202ENST00000471909 PF4P02776 101 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 DNAJC30Q96LL9 226 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 C2CD3Q4AC94 2353 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
RRP1-202ENST00000471909 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 COX6CP09669 75 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 CHCHD7Q9BUK0 85 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 SPANXDQ9BXN6 97 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 SPANXCQ9NY87 97 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 IGHV3-38A0A0C4DH36 116 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 B5MCH6 92 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
RRP1-202ENST00000471909 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
RRP1-202ENST00000471909 FN1P02751 2386 aaKnown RBP12.42□□□□□ -0.42
RRP1-202ENST00000471909 ADAMTSL4-AS1Q5T5F5 129 aa12.42□□□□□ -0.42
RRP1-202ENST00000471909 IFITM1P13164 125 aa12.42□□□□□ -0.42
RRP1-202ENST00000471909 MIAQ16674 131 aa12.42□□□□□ -0.42
RRP1-202ENST00000471909 Q6Q795 121 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms