RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CD164L2Q6UWJ8 174 aa6.32□□□□□ -1.4
CD47-204ENST00000471694 NUP210LQ5VU65 1888 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 NOTCH3Q9UM47 2321 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 COLCA2A8K830 154 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 FHL3Q13643 280 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 EBI3Q14213 229 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 MUC7Q8TAX7 377 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 ARHGAP21Q5T5U3 1957 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 SPANXB1Q9NS25 103 aaPredicted RBP6.31□□□□□ -1.4
CD47-204ENST00000471694 SERP1Q9Y6X1 66 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 KIAA1549LQ6ZVL6 1849 aa6.31□□□□□ -1.4
CD47-204ENST00000471694 PRRC2AP48634 2157 aaKnown RBP6.3□□□□□ -1.4
CD47-204ENST00000471694 CLEC2BQ92478 149 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 PRM2P04554 102 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
CD47-204ENST00000471694 PDE6GP18545 87 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 CTRLP40313 264 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 F8W1H4 67 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 FAM167A-AS1Q96KT0 104 aa6.3□□□□□ -1.4
CD47-204ENST00000471694 IGLV1-40P01703 118 aa6.29□□□□□ -1.4
CD47-204ENST00000471694 KRTAP24-1Q3LI83 254 aa6.29□□□□□ -1.4
CD47-204ENST00000471694 RAI1Q7Z5J4 1906 aaPredicted RBP6.29□□□□□ -1.4
CD47-204ENST00000471694 IGLV1-51P01701 117 aa6.29□□□□□ -1.4
CD47-204ENST00000471694 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
CD47-204ENST00000471694 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
CD47-204ENST00000471694 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
CD47-204ENST00000471694 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 C3orf84H3BNL1 204 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 C1orf229Q6ZS94 237 aaPredicted RBP6.27□□□□□ -1.41
CD47-204ENST00000471694 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 PCP4P48539 62 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 POM121L12Q8N7R1 296 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 ZNF80P51504 273 aaPredicted RBP6.27□□□□□ -1.41
CD47-204ENST00000471694 PCDH15Q96QU1 1955 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 LIMD2Q9BT23 127 aa6.27□□□□□ -1.41
CD47-204ENST00000471694 POLR3KQ9Y2Y1 108 aaPredicted RBP6.27□□□□□ -1.41
CD47-204ENST00000471694 IBA57-AS1B1ANH7 110 aa6.26□□□□□ -1.41
CD47-204ENST00000471694 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
CD47-204ENST00000471694 PTPN13Q12923 2485 aa6.26□□□□□ -1.41
CD47-204ENST00000471694 LINC00574Q9H8X3 128 aa6.26□□□□□ -1.41
CD47-204ENST00000471694 CDKN2A-AS1Q9UH64 79 aa6.25□□□□□ -1.41
CD47-204ENST00000471694 ETDBQ3ZM63 59 aa6.25□□□□□ -1.41
CD47-204ENST00000471694 E9PLD3 99 aa6.25□□□□□ -1.41
CD47-204ENST00000471694 K7EP34 96 aa6.25□□□□□ -1.41
CD47-204ENST00000471694 LST1O00453 97 aa6.25□□□□□ -1.41
CD47-204ENST00000471694 FREM1Q5H8C1 2179 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 WFDC13Q8IUB5 93 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 SHANK1Q9Y566 2161 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 CCKP06307 115 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 COX6A2Q02221 97 aa6.24□□□□□ -1.41
CD47-204ENST00000471694 EDN2P20800 178 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 ALPK3Q96L96 1907 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 Q8N6K4 173 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
CD47-204ENST00000471694 MRPL52Q86TS9 123 aaKnown RBP6.23□□□□□ -1.41
CD47-204ENST00000471694 MED12LQ86YW9 2145 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 MED13LQ71F56 2210 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 M0QY20 66 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 CYSRT1A8MQ03 144 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 DLEU1O43261 78 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 ODF3L2Q3SX64 289 aa6.23□□□□□ -1.41
CD47-204ENST00000471694 EXPH5Q8NEV8 1989 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 A0A0J9YXY3 114 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 ESRGQ1W209 222 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 TET2Q6N021 2002 aaPredicted RBP6.22□□□□□ -1.41
CD47-204ENST00000471694 PRR4Q16378 134 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
CD47-204ENST00000471694 SBSPONQ8IVN8 264 aa6.21□□□□□ -1.41
CD47-204ENST00000471694 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
CD47-204ENST00000471694 LINC00173Q6ZV60 143 aa6.21□□□□□ -1.42
CD47-204ENST00000471694 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
CD47-204ENST00000471694 CHCHD7Q9BUK0 85 aa6.2□□□□□ -1.42
CD47-204ENST00000471694 CUL9Q8IWT3 2517 aa6.2□□□□□ -1.42
CD47-204ENST00000471694 PCNX3Q9H6A9 2034 aa6.2□□□□□ -1.42
CD47-204ENST00000471694 LYPD5Q6UWN5 251 aa6.2□□□□□ -1.42
CD47-204ENST00000471694 COX17Q14061 63 aa6.2□□□□□ -1.42
CD47-204ENST00000471694 KIAA1549Q9HCM3 1950 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 A0A1B0GXF2 115 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 ADAMTS20P59510 1910 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 IGLC6P0CF74 106 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 Q8N9L7 120 aa6.19□□□□□ -1.42
CD47-204ENST00000471694 WNK1Q9H4A3 2382 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
CD47-204ENST00000471694 RTL8CO15255 209 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms