RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ERASQ7Z444 233 aa13.01□□□□□ -0.33
PSPC1-203ENST00000471658 OR5A1Q8NGJ0 315 aa13.01□□□□□ -0.33
PSPC1-203ENST00000471658 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
PSPC1-203ENST00000471658 SPANXA1Q9NS26 97 aa13.01□□□□□ -0.33
PSPC1-203ENST00000471658 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
PSPC1-203ENST00000471658 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
PSPC1-203ENST00000471658 LINC00476Q8WZB0 136 aa13□□□□□ -0.33
PSPC1-203ENST00000471658 CDC42SE2Q9NRR3 84 aa13□□□□□ -0.33
PSPC1-203ENST00000471658 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 ANGP03950 147 aaKnown RBP12.99□□□□□ -0.33
PSPC1-203ENST00000471658 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
PSPC1-203ENST00000471658 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
PSPC1-203ENST00000471658 PKIAP61925 76 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 TIMM17AQ99595 171 aa12.99□□□□□ -0.33
PSPC1-203ENST00000471658 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
PSPC1-203ENST00000471658 LINC00269Q8N2A0 174 aa12.98□□□□□ -0.33
PSPC1-203ENST00000471658 LINC01549A6NIU2 74 aa12.97□□□□□ -0.33
PSPC1-203ENST00000471658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.97□□□□□ -0.33
PSPC1-203ENST00000471658 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
PSPC1-203ENST00000471658 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
PSPC1-203ENST00000471658 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
PSPC1-203ENST00000471658 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
PSPC1-203ENST00000471658 IFI27L1Q96BM0 104 aa12.96□□□□□ -0.33
PSPC1-203ENST00000471658 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.33
PSPC1-203ENST00000471658 KRTAP1-5Q9BYS1 174 aa12.96□□□□□ -0.33
PSPC1-203ENST00000471658 SACSQ9NZJ4 4579 aa12.96□□□□□ -0.34
PSPC1-203ENST00000471658 ATP5LO75964 103 aa12.95□□□□□ -0.34
PSPC1-203ENST00000471658 S100A2P29034 98 aa12.95□□□□□ -0.34
PSPC1-203ENST00000471658 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
PSPC1-203ENST00000471658 ENHOQ6UWT2 76 aa12.95□□□□□ -0.34
PSPC1-203ENST00000471658 HSPB8Q9UJY1 196 aa12.95□□□□□ -0.34
PSPC1-203ENST00000471658 M0R2N4 97 aa12.94□□□□□ -0.34
PSPC1-203ENST00000471658 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
PSPC1-203ENST00000471658 AMELXQ99217 191 aa12.94□□□□□ -0.34
PSPC1-203ENST00000471658 VCX2Q9H322 139 aa12.94□□□□□ -0.34
PSPC1-203ENST00000471658 Q6ZN92 141 aa12.93□□□□□ -0.34
PSPC1-203ENST00000471658 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
PSPC1-203ENST00000471658 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
PSPC1-203ENST00000471658 PRSS29PA6NIE9 313 aa12.92□□□□□ -0.34
PSPC1-203ENST00000471658 H0Y8G0 127 aa12.92□□□□□ -0.34
PSPC1-203ENST00000471658 PRSS1P07477 247 aa12.92□□□□□ -0.34
PSPC1-203ENST00000471658 REG3AQ06141 175 aa12.92□□□□□ -0.34
PSPC1-203ENST00000471658 NPSP0C0P6 89 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 PACRGQ96M98 296 aaPredicted RBP12.91□□□□□ -0.34
PSPC1-203ENST00000471658 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 KMT2AQ03164 3969 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 TRAV13-1A0A0B4J241 112 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 IBA57-AS1B1ANH7 110 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
PSPC1-203ENST00000471658 PMVKQ15126 192 aa12.9□□□□□ -0.34
PSPC1-203ENST00000471658 Q9HAA7 133 aa12.9□□□□□ -0.34
PSPC1-203ENST00000471658 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
PSPC1-203ENST00000471658 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
PSPC1-203ENST00000471658 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
PSPC1-203ENST00000471658 SPATA12Q7Z6I5 190 aa12.89□□□□□ -0.35
PSPC1-203ENST00000471658 DNAH6Q9C0G6 4158 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 CRPP02741 224 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 KRTDAPP60985 99 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 C10orf126Q8N4M7 172 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
PSPC1-203ENST00000471658 LCE6AA0A183 80 aa12.87□□□□□ -0.35
PSPC1-203ENST00000471658 UBE2D1P51668 147 aa12.87□□□□□ -0.35
PSPC1-203ENST00000471658 C2orf88Q9BSF0 95 aa12.87□□□□□ -0.35
PSPC1-203ENST00000471658 A0A0J9YXV3 536 aa12.86□□□□□ -0.35
PSPC1-203ENST00000471658 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
PSPC1-203ENST00000471658 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
PSPC1-203ENST00000471658 OR10D4PQ8NGN7 298 aa12.86□□□□□ -0.35
PSPC1-203ENST00000471658 PMCHL2Q9BQD1 86 aa12.86□□□□□ -0.35
PSPC1-203ENST00000471658 K7EP13 123 aa12.85□□□□□ -0.35
PSPC1-203ENST00000471658 Q6ZR54 194 aa12.85□□□□□ -0.35
PSPC1-203ENST00000471658 DNAH10Q8IVF4 4471 aa12.85□□□□□ -0.35
PSPC1-203ENST00000471658 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 COX6A2Q02221 97 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 KMT2CQ8NEZ4 4911 aaKnown RBP12.84□□□□□ -0.35
PSPC1-203ENST00000471658 DNAH2Q9P225 4427 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 CCL25O15444 150 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 ODF1Q14990 250 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 SS18Q15532 418 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 MIAQ16674 131 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 LINC00242Q5T6M2 205 aa12.84□□□□□ -0.35
PSPC1-203ENST00000471658 CHCHD10Q8WYQ3 142 aaPredicted RBP12.84□□□□□ -0.35
PSPC1-203ENST00000471658 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
PSPC1-203ENST00000471658 CHTOPQ9Y3Y2 248 aaKnown RBP12.84□□□□□ -0.35
PSPC1-203ENST00000471658 IGLV4-69A0A075B6H9 119 aa12.83□□□□□ -0.36
PSPC1-203ENST00000471658 TRAV8-3A0A0A6YYJ7 113 aa12.83□□□□□ -0.36
PSPC1-203ENST00000471658 XCL1P47992 114 aa12.83□□□□□ -0.36
PSPC1-203ENST00000471658 IGKV2D-24A0A075B6R9 120 aa12.82□□□□□ -0.36
PSPC1-203ENST00000471658 KRTAP26-1Q6PEX3 210 aa12.82□□□□□ -0.36
PSPC1-203ENST00000471658 PET117Q6UWS5 81 aa12.81□□□□□ -0.36
PSPC1-203ENST00000471658 RYR2Q92736 4967 aa12.81□□□□□ -0.36
PSPC1-203ENST00000471658 TRAV8-4A0A0B4J246 113 aa12.8□□□□□ -0.36
PSPC1-203ENST00000471658 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
PSPC1-203ENST00000471658 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
PSPC1-203ENST00000471658 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms