RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 HMCN2Q8NDA2 5059 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 SPTBN2O15020 2390 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 ROBO1Q9Y6N7 1651 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 TRBV7-3A0A075B6L6 115 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 F8VRH5 84 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 UQCR11O14957 56 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 BAGE2Q86Y30 109 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 C8orf59Q8N0T1 100 aaPredicted RBP-0.14□□□□□ -2.43
COPS3-206ENST00000471414 LINC00472Q9H8W2 130 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 DOPEY2Q9Y3R5 2298 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 ABCA2Q9BZC7 2435 aa-0.14□□□□□ -2.43
COPS3-206ENST00000471414 NALCNQ8IZF0 1738 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 SSSCA1O60232 199 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 IFNGP01579 166 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 APOC3P02656 99 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 TPPP2P59282 170 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 Q6JHZ5 121 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 C5orf38Q86SI9 138 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 TSLPQ969D9 159 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 C2CD3Q4AC94 2353 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 MYOM1P52179 1685 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 CUL7Q14999 1698 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 PLCE1Q9P212 2302 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 ZNF292O60281 2723 aa-0.15□□□□□ -2.43
COPS3-206ENST00000471414 A2ML1A8K2U0 1454 aa-0.16□□□□□ -2.43
COPS3-206ENST00000471414 PAPPAQ13219 1627 aa-0.16□□□□□ -2.43
COPS3-206ENST00000471414 NCOR1O75376 2440 aa-0.16□□□□□ -2.43
COPS3-206ENST00000471414 PTPRQQ9UMZ3 2332 aa-0.16□□□□□ -2.43
COPS3-206ENST00000471414 IGLC7A0M8Q6 106 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 I3L2K1 104 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 HMGN4O00479 90 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 AKAIN1P0CW23 69 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 SPRR1AP35321 89 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 DCDP81605 110 aaKnown RBP-0.16□□□□□ -2.44
COPS3-206ENST00000471414 COMMD6Q7Z4G1 85 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 PP6455Q8WZ26 134 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 LINC01558Q9Y6Z2 57 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 C10orf71Q711Q0 1435 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 RAPGEF6Q8TEU7 1601 aa-0.16□□□□□ -2.44
COPS3-206ENST00000471414 CACNA1AO00555 2505 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 KTN1Q86UP2 1357 aaKnown RBP-0.17□□□□□ -2.44
COPS3-206ENST00000471414 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 LOC285095A0A1B0GVY8 99 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 MYCBP2O75592 4640 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 PKDREJQ9NTG1 2253 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 MYO7BQ6PIF6 2116 aa-0.17□□□□□ -2.44
COPS3-206ENST00000471414 ROCK2O75116 1388 aaKnown RBP-0.18□□□□□ -2.44
COPS3-206ENST00000471414 CSMD3Q7Z407 3707 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 ARHGEF5Q12774 1597 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 RPL13AP3Q6NVV1 102 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 MRPL54Q6P161 138 aaKnown RBP-0.18□□□□□ -2.44
COPS3-206ENST00000471414 MYOZ3Q8TDC0 251 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 LINC00474Q9P2X8 69 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 AKAP6Q13023 2319 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 USF3Q68DE3 2245 aa-0.18□□□□□ -2.44
COPS3-206ENST00000471414 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.18□□□□□ -2.44
COPS3-206ENST00000471414 TSC2P49815 1807 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 FXYD6-FXYD2A0A087WZ82 144 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 TRBV6-1A0A0K0K1D8 114 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 OOSP1A8MZH6 123 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 SFT2D2O95562 160 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 TNFP01375 233 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 PIGYQ3MUY2 71 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 C9orf153Q5TBE3 101 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 SHANK2Q9UPX8 1470 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 TET3O43151 1660 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 FLNCQ14315 2725 aa-0.19□□□□□ -2.44
COPS3-206ENST00000471414 SMG6Q86US8 1419 aaKnown RBP-0.2□□□□□ -2.44
COPS3-206ENST00000471414 KDM5AP29375 1690 aaKnown RBP-0.2□□□□□ -2.44
COPS3-206ENST00000471414 MYOM2P54296 1465 aa-0.2□□□□□ -2.44
COPS3-206ENST00000471414 EFCAB10A6NFE3 127 aa-0.2□□□□□ -2.44
COPS3-206ENST00000471414 SPRR2DP22532 72 aa-0.2□□□□□ -2.44
COPS3-206ENST00000471414 TENM4Q6N022 2769 aa-0.2□□□□□ -2.44
COPS3-206ENST00000471414 KMT2AQ03164 3969 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 ARHGEF12Q9NZN5 1544 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 UBE2L5PA0A1B0GUS4 154 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 CHKB-CPT1BH3BT56 60 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 MGPP08493 103 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 ATP5EP56381 51 aaPredicted RBP-0.21□□□□□ -2.44
COPS3-206ENST00000471414 UBE2L3P68036 154 aaKnown RBP-0.21□□□□□ -2.44
COPS3-206ENST00000471414 CDC42SE2Q9NRR3 84 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 UQCR10Q9UDW1 63 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 VWFP04275 2813 aa-0.21□□□□□ -2.44
COPS3-206ENST00000471414 LPAP08519 4548 aa-0.22□□□□□ -2.44
COPS3-206ENST00000471414 DLEU1O43261 78 aa-0.22□□□□□ -2.44
COPS3-206ENST00000471414 SNAPC5O75971 98 aa-0.22□□□□□ -2.44
COPS3-206ENST00000471414 PRM1P04553 51 aa-0.22□□□□□ -2.44
COPS3-206ENST00000471414 NXT2Q9NPJ8 142 aaKnown RBP-0.22□□□□□ -2.44
COPS3-206ENST00000471414 PTPN13Q12923 2485 aa-0.22□□□□□ -2.44
COPS3-206ENST00000471414 NSD3Q9BZ95 1437 aa-0.22□□□□□ -2.45
COPS3-206ENST00000471414 WDR7Q9Y4E6 1490 aa-0.22□□□□□ -2.45
COPS3-206ENST00000471414 EIF4G3O43432 1585 aaKnown RBP-0.23□□□□□ -2.45
COPS3-206ENST00000471414 A0A1B0GV90 55 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 FAM24AA6NFZ4 105 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 IGLC1P0CG04 106 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 COX6B1P14854 86 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 TMEM263Q8WUH6 116 aaKnown RBP-0.23□□□□□ -2.45
COPS3-206ENST00000471414 SPRR4Q96PI1 79 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 DPH3P1Q9H4G8 78 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms