RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 SPATA45Q537H7 98 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 CSDC2Q9Y534 153 aaKnown RBP8.3□□□□□ -1.08
LINC00880-201ENST00000471357 PLNP26678 52 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 PKIAP61925 76 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
LINC00880-201ENST00000471357 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 AMELXQ99217 191 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 PRO1933Q9H354 126 aa8.3□□□□□ -1.08
LINC00880-201ENST00000471357 DEFA6Q01524 100 aa8.29□□□□□ -1.08
LINC00880-201ENST00000471357 Q6ZUT4 128 aa8.29□□□□□ -1.08
LINC00880-201ENST00000471357 TRAV10A0A0B4J240 114 aa8.29□□□□□ -1.08
LINC00880-201ENST00000471357 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
LINC00880-201ENST00000471357 GAGE6Q13070 117 aa8.29□□□□□ -1.08
LINC00880-201ENST00000471357 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
LINC00880-201ENST00000471357 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
LINC00880-201ENST00000471357 PCP4L1A6NKN8 68 aa8.28□□□□□ -1.08
LINC00880-201ENST00000471357 TSTD3H0UI37 97 aa8.28□□□□□ -1.08
LINC00880-201ENST00000471357 STPG4Q8N801 248 aa8.28□□□□□ -1.08
LINC00880-201ENST00000471357 OR5A1Q8NGJ0 315 aa8.28□□□□□ -1.08
LINC00880-201ENST00000471357 IGLV4-69A0A075B6H9 119 aa8.27□□□□□ -1.09
LINC00880-201ENST00000471357 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
LINC00880-201ENST00000471357 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
LINC00880-201ENST00000471357 C2orf88Q9BSF0 95 aa8.27□□□□□ -1.09
LINC00880-201ENST00000471357 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
LINC00880-201ENST00000471357 LELP1Q5T871 98 aa8.26□□□□□ -1.09
LINC00880-201ENST00000471357 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 LYPD5Q6UWN5 251 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 TIRAPP58753 221 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
LINC00880-201ENST00000471357 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 UBE2D1P51668 147 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 TCTAP57738 103 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 C14orf144Q96I85 54 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 CHAC1Q9BUX1 264 aa8.24□□□□□ -1.09
LINC00880-201ENST00000471357 RBX1P62877 108 aa8.23□□□□□ -1.09
LINC00880-201ENST00000471357 MPV17L2Q567V2 206 aa8.23□□□□□ -1.09
LINC00880-201ENST00000471357 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 C15orf53Q8NAA6 179 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 PRKDCP78527 4128 aaKnown RBP8.22□□□□□ -1.09
LINC00880-201ENST00000471357 TRAV8-6A0A0B4J262 113 aa8.22□□□□□ -1.09
LINC00880-201ENST00000471357 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.1
LINC00880-201ENST00000471357 ZNF22P17026 224 aaPredicted RBP8.21□□□□□ -1.1
LINC00880-201ENST00000471357 DDTP30046 118 aa8.21□□□□□ -1.1
LINC00880-201ENST00000471357 NMUP48645 174 aa8.21□□□□□ -1.1
LINC00880-201ENST00000471357 FAM19A3Q7Z5A8 133 aa8.21□□□□□ -1.1
LINC00880-201ENST00000471357 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 COX8AP10176 69 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 HERVK_113P61574 105 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 SEC11AP67812 179 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 ESRGQ1W209 222 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
LINC00880-201ENST00000471357 IGLL5B9A064 214 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 HERVK_113P63121 156 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 SLC25A34Q6PIV7 304 aa8.2□□□□□ -1.1
LINC00880-201ENST00000471357 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
LINC00880-201ENST00000471357 E9PLD3 99 aa8.19□□□□□ -1.1
LINC00880-201ENST00000471357 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
LINC00880-201ENST00000471357 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
LINC00880-201ENST00000471357 ANGP03950 147 aaKnown RBP8.18□□□□□ -1.1
LINC00880-201ENST00000471357 COX6A2Q02221 97 aa8.18□□□□□ -1.1
LINC00880-201ENST00000471357 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
LINC00880-201ENST00000471357 Q8N3U1 123 aa8.18□□□□□ -1.1
LINC00880-201ENST00000471357 LINC00469Q8N7U9 141 aa8.18□□□□□ -1.1
LINC00880-201ENST00000471357 IGLV5-45A0A087WSX0 123 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 COL7A1Q02388 2944 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 LINC00959A0A1B0GUT2 108 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 H3BRM9 83 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 WFDC10BQ8IUB3 73 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 LINC00269Q8N2A0 174 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 TP73-AS1Q9UF72 201 aa8.17□□□□□ -1.1
LINC00880-201ENST00000471357 LINC00587B1AMM8 73 aa8.16□□□□□ -1.1
LINC00880-201ENST00000471357 DLEU1O43261 78 aa8.16□□□□□ -1.1
LINC00880-201ENST00000471357 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
LINC00880-201ENST00000471357 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
LINC00880-201ENST00000471357 MEGF8Q7Z7M0 2845 aa8.16□□□□□ -1.1
LINC00880-201ENST00000471357 SS18Q15532 418 aa8.15□□□□□ -1.1
LINC00880-201ENST00000471357 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
LINC00880-201ENST00000471357 IGHV3-64A0A075B6Q5 118 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 CCL25O15444 150 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 IGHV3-30P01768 117 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 IGHV3-33P01772 117 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 IGHV3-30-3P0DP02 117 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 IGHV3-30-5P0DP03 117 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 CCL18P55774 89 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 REG3AQ06141 175 aa8.15□□□□□ -1.11
LINC00880-201ENST00000471357 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
LINC00880-201ENST00000471357 LEPROTO15243 131 aa8.14□□□□□ -1.11
LINC00880-201ENST00000471357 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms