RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 MRAPQ8TCY5 172 aa18.09■□□□□ 0.49
U2AF1-208ENST00000471250 DGAT2L7PQ6IED9 249 aa18.09■□□□□ 0.49
U2AF1-208ENST00000471250 C11orf86A6NJI1 115 aa18.08■□□□□ 0.48
U2AF1-208ENST00000471250 UBE2L6O14933 153 aa18.08■□□□□ 0.48
U2AF1-208ENST00000471250 NOTCH1P46531 2555 aa18.07■□□□□ 0.48
U2AF1-208ENST00000471250 COX8AP10176 69 aa18.06■□□□□ 0.48
U2AF1-208ENST00000471250 NFE4Q86UQ8 179 aa18.06■□□□□ 0.48
U2AF1-208ENST00000471250 RNASE13Q5GAN3 156 aaKnown RBP18.06■□□□□ 0.48
U2AF1-208ENST00000471250 TCTAP57738 103 aa18.05■□□□□ 0.48
U2AF1-208ENST00000471250 SLC25A34Q6PIV7 304 aa18.05■□□□□ 0.48
U2AF1-208ENST00000471250 MRPL23Q16540 153 aaKnown RBP18.04■□□□□ 0.48
U2AF1-208ENST00000471250 AMMECR1LQ6DCA0 310 aa18.04■□□□□ 0.48
U2AF1-208ENST00000471250 Q6ZTC4 211 aa18.04■□□□□ 0.48
U2AF1-208ENST00000471250 A0A096LPF7 62 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 C11orf45Q8TAV5 145 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 C2orf88Q9BSF0 95 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 ICOSQ9Y6W8 199 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 IGKV2D-26A0A0A0MRZ7 120 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 OR5A1Q8NGJ0 315 aa18.03■□□□□ 0.48
U2AF1-208ENST00000471250 A0A0J9YXV3 536 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 ZNF25P17030 456 aaPredicted RBP18.02■□□□□ 0.47
U2AF1-208ENST00000471250 NMUP48645 174 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 GAGE6Q13070 117 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 SH2D6Q7Z4S9 175 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 TMEM101Q96IK0 257 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 CHCHD5Q9BSY4 110 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 CDC42SE2Q9NRR3 84 aa18.02■□□□□ 0.47
U2AF1-208ENST00000471250 DEFA6Q01524 100 aa18.01■□□□□ 0.47
U2AF1-208ENST00000471250 CHAC1Q9BUX1 264 aa18.01■□□□□ 0.47
U2AF1-208ENST00000471250 HNRNPA3P51991 378 aaKnown RBP18■□□□□ 0.47
U2AF1-208ENST00000471250 NANOS2P60321 138 aaKnown RBP18■□□□□ 0.47
U2AF1-208ENST00000471250 MGAM2Q2M2H8 2515 aa18■□□□□ 0.47
U2AF1-208ENST00000471250 NBEAL1Q6ZS30 2694 aa18■□□□□ 0.47
U2AF1-208ENST00000471250 H3BNG1 76 aa17.99■□□□□ 0.47
U2AF1-208ENST00000471250 TP73-AS1Q9UF72 201 aa17.99■□□□□ 0.47
U2AF1-208ENST00000471250 BOD1L2Q8IYS8 172 aa17.99■□□□□ 0.47
U2AF1-208ENST00000471250 DLEU1O43261 78 aa17.98■□□□□ 0.47
U2AF1-208ENST00000471250 UBE2D1P51668 147 aa17.98■□□□□ 0.47
U2AF1-208ENST00000471250 TMEM170BQ5T4T1 132 aa17.98■□□□□ 0.47
U2AF1-208ENST00000471250 E9PLD3 99 aa17.97■□□□□ 0.47
U2AF1-208ENST00000471250 PCP2Q8IVA1 136 aa17.97■□□□□ 0.47
U2AF1-208ENST00000471250 TINCRA0A1B0GVN0 87 aa17.96■□□□□ 0.47
U2AF1-208ENST00000471250 ZNF22P17026 224 aaPredicted RBP17.96■□□□□ 0.47
U2AF1-208ENST00000471250 KRTAP21-3Q3LHN1 58 aa17.96■□□□□ 0.47
U2AF1-208ENST00000471250 HERVK_113P61574 105 aa17.96■□□□□ 0.47
U2AF1-208ENST00000471250 MRPS16Q9Y3D3 137 aaKnown RBP17.96■□□□□ 0.47
U2AF1-208ENST00000471250 CTAG1AP78358 180 aa17.95■□□□□ 0.46
U2AF1-208ENST00000471250 FAM19A3Q7Z5A8 133 aa17.94■□□□□ 0.46
U2AF1-208ENST00000471250 IGLV4-60A0A075B6I1 120 aa17.93■□□□□ 0.46
U2AF1-208ENST00000471250 DEFB131BA0A096LNP1 70 aa17.93■□□□□ 0.46
U2AF1-208ENST00000471250 TMEM223A0PJW6 202 aa17.93■□□□□ 0.46
U2AF1-208ENST00000471250 TIRAPP58753 221 aa17.93■□□□□ 0.46
U2AF1-208ENST00000471250 B9D2Q9BPU9 175 aa17.92■□□□□ 0.46
U2AF1-208ENST00000471250 TENM3Q9P273 2699 aa17.91■□□□□ 0.46
U2AF1-208ENST00000471250 A0A1B0GUV1 79 aa17.91■□□□□ 0.46
U2AF1-208ENST00000471250 LELP1Q5T871 98 aa17.91■□□□□ 0.46
U2AF1-208ENST00000471250 TTTY13Q9BZ97 58 aa17.91■□□□□ 0.46
U2AF1-208ENST00000471250 TMEM262E9PQX1 116 aa17.9■□□□□ 0.46
U2AF1-208ENST00000471250 C2orf91Q6ZV80 131 aa17.9■□□□□ 0.46
U2AF1-208ENST00000471250 TRAV8-6A0A0B4J262 113 aa17.9■□□□□ 0.46
U2AF1-208ENST00000471250 GEMIN7Q9H840 131 aaKnown RBP17.9■□□□□ 0.46
U2AF1-208ENST00000471250 SIVA1O15304 175 aa17.89■□□□□ 0.45
U2AF1-208ENST00000471250 SEC11AP67812 179 aa17.89■□□□□ 0.45
U2AF1-208ENST00000471250 LINC00242Q5T6M2 205 aa17.89■□□□□ 0.45
U2AF1-208ENST00000471250 MAPKAPK5-AS1Q8N8E1 139 aa17.89■□□□□ 0.45
U2AF1-208ENST00000471250 HUWE1Q7Z6Z7 4374 aaKnown RBP17.89■□□□□ 0.45
U2AF1-208ENST00000471250 TRAV13-1A0A0B4J241 112 aa17.88■□□□□ 0.45
U2AF1-208ENST00000471250 RBX1P62877 108 aa17.88■□□□□ 0.45
U2AF1-208ENST00000471250 IGLV5-45A0A087WSX0 123 aa17.87■□□□□ 0.45
U2AF1-208ENST00000471250 MPV17L2Q567V2 206 aa17.87■□□□□ 0.45
U2AF1-208ENST00000471250 LYPD5Q6UWN5 251 aa17.87■□□□□ 0.45
U2AF1-208ENST00000471250 TRAV10A0A0B4J240 114 aa17.87■□□□□ 0.45
U2AF1-208ENST00000471250 HERVK_113P63121 156 aa17.87■□□□□ 0.45
U2AF1-208ENST00000471250 COX6A2Q02221 97 aa17.86■□□□□ 0.45
U2AF1-208ENST00000471250 M0R143 59 aa17.85■□□□□ 0.45
U2AF1-208ENST00000471250 LEPROTO15243 131 aa17.85■□□□□ 0.45
U2AF1-208ENST00000471250 LINC00469Q8N7U9 141 aa17.85■□□□□ 0.45
U2AF1-208ENST00000471250 SNHG12Q9BXW3 62 aa17.85■□□□□ 0.45
U2AF1-208ENST00000471250 MYMXA0A1B0GTQ4 84 aa17.83■□□□□ 0.45
U2AF1-208ENST00000471250 CDKN2A-AS1Q9UH64 79 aa17.83■□□□□ 0.44
U2AF1-208ENST00000471250 EREGO14944 169 aa17.82■□□□□ 0.44
U2AF1-208ENST00000471250 H3BRM9 83 aa17.81■□□□□ 0.44
U2AF1-208ENST00000471250 TSPEAR-AS2P59090 65 aa17.81■□□□□ 0.44
U2AF1-208ENST00000471250 PLEKHB2Q96CS7 222 aa17.81■□□□□ 0.44
U2AF1-208ENST00000471250 HIGD1BQ9P298 99 aa17.81■□□□□ 0.44
U2AF1-208ENST00000471250 J3QQQ9 107 aa17.8■□□□□ 0.44
U2AF1-208ENST00000471250 IGHV1-58A0A0C4DH39 117 aa17.8■□□□□ 0.44
U2AF1-208ENST00000471250 IGHV3-64A0A075B6Q5 118 aa17.79■□□□□ 0.44
U2AF1-208ENST00000471250 IGKV3OR2-268A0A0C4DH90 116 aa17.79■□□□□ 0.44
U2AF1-208ENST00000471250 ZNF815PA8K554 130 aa17.79■□□□□ 0.44
U2AF1-208ENST00000471250 SPINK8P0C7L1 97 aa17.78■□□□□ 0.44
U2AF1-208ENST00000471250 IGHV3-30-3P0DP02 117 aa17.78■□□□□ 0.44
U2AF1-208ENST00000471250 LGALS3P17931 250 aaKnown RBP17.78■□□□□ 0.44
U2AF1-208ENST00000471250 TRAV8-3A0A0A6YYJ7 113 aa17.77■□□□□ 0.44
U2AF1-208ENST00000471250 LINC00959A0A1B0GUT2 108 aa17.77■□□□□ 0.44
U2AF1-208ENST00000471250 NHLRC4P0CG21 123 aaPredicted RBP17.76■□□□□ 0.43
U2AF1-208ENST00000471250 HINT1P49773 126 aaPredicted RBP17.76■□□□□ 0.43
U2AF1-208ENST00000471250 Q8N3U1 123 aa17.76■□□□□ 0.43
U2AF1-208ENST00000471250 DNAH9Q9NYC9 4486 aa17.75■□□□□ 0.43
U2AF1-208ENST00000471250 ESRGQ1W209 222 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms