RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MGPP08493 103 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 CRIP1P50238 77 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 TIRAPP58753 221 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 RPL24P83731 157 aaKnown RBP3.89□□□□□ -1.79
VARS-222ENST00000470953 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
VARS-222ENST00000470953 GTF2H5Q6ZYL4 71 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 COX8CQ7Z4L0 72 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 STPG4Q8N801 248 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
VARS-222ENST00000470953 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 DERL1Q9BUN8 251 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 VAMP8Q9BV40 100 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 CTDSP1Q9GZU7 261 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 GTSF1LQ9H1H1 148 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 JPT2Q9H910 190 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 ERG28Q9UKR5 140 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 M0QXV9 152 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 TRGC2P03986 189 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 CXCL1P09341 107 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 CCL20P78556 96 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 SRSF3P84103 164 aaKnown RBP3.88□□□□□ -1.79
VARS-222ENST00000470953 HSD52Q0P140 79 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 PNRC1Q12796 327 aaPredicted RBP3.88□□□□□ -1.79
VARS-222ENST00000470953 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 LINC01556Q5JQF7 62 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 MRPL54Q6P161 138 aaKnown RBP3.88□□□□□ -1.79
VARS-222ENST00000470953 SCXQ7RTU7 201 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 C14orf178Q8N769 122 aaPredicted RBP3.88□□□□□ -1.79
VARS-222ENST00000470953 OR5A1Q8NGJ0 315 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 SAMD10Q9BYL1 202 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 HSPB8Q9UJY1 196 aa3.88□□□□□ -1.79
VARS-222ENST00000470953 A0A087WX48 190 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 TRBV10-1A0A0K0K1A3 114 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 LRCOL1A6NCL2 159 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 H7C1H1 209 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 CRPP02741 224 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 OR5AL1P0C617 328 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 CTRLP40313 264 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 CACNG7P62955 275 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 BATFQ16520 125 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 BORCS7Q96B45 105 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 RMI2Q96E14 147 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 TM2D2Q9BX73 214 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 EIF5A2Q9GZV4 153 aaKnown RBP3.87□□□□□ -1.79
VARS-222ENST00000470953 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 SS18L2Q9UHA2 77 aa3.87□□□□□ -1.79
VARS-222ENST00000470953 CSDC2Q9Y534 153 aaKnown RBP3.87□□□□□ -1.79
VARS-222ENST00000470953 TRBV7-3A0A075B6L6 115 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 TMEM262E9PQX1 116 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 PANO1I0J062 215 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 LAGE3Q14657 143 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 LINC01620Q4KN68 170 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 MLST8Q9BVC4 326 aa3.86□□□□□ -1.79
VARS-222ENST00000470953 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
VARS-222ENST00000470953 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 F2Z2F3 143 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 TMEM250H0YL14 139 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 LINC00694P0DN24 101 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 AMTP48728 403 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 SMAGPQ0VAQ4 97 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 TWIST1Q15672 202 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 TMEM97Q5BJF2 176 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 SMIM7Q9BQ49 75 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 NAT8BQ9UHF3 227 aa3.85□□□□□ -1.79
VARS-222ENST00000470953 TRBV20OR9-2A0A075B6H5 130 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 TRBV25-1A0A075B6N4 114 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 A6NDN8 102 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 IBA57-AS1B1ANH7 110 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 UBE2L6O14933 153 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 IGLV2-8P01709 118 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
VARS-222ENST00000470953 UBE2D3P61077 147 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 UBE2D2P62837 147 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 LYZL1Q6UWQ5 148 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 Q6ZN92 141 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 DAZ4Q86SG3 579 aaKnown RBP3.84□□□□□ -1.79
VARS-222ENST00000470953 Q8N814 137 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 NTN5Q8WTR8 489 aaPredicted RBP3.84□□□□□ -1.79
VARS-222ENST00000470953 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 DNAJC30Q96LL9 226 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 MAP1LC3CQ9BXW4 147 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 RNASE7Q9H1E1 156 aaKnown RBP3.84□□□□□ -1.79
VARS-222ENST00000470953 DPH3P1Q9H4G8 78 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 DAZ3Q9NR90 486 aaKnown RBP3.84□□□□□ -1.79
VARS-222ENST00000470953 KLK12Q9UKR0 248 aa3.84□□□□□ -1.79
VARS-222ENST00000470953 TRBV6-8A0A0A6YYG3 113 aa3.83□□□□□ -1.8
VARS-222ENST00000470953 IGHV1-24A0A0C4DH33 117 aa3.83□□□□□ -1.8
VARS-222ENST00000470953 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms