RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 B4DSR2 109 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 H7C2G1 150 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 M0R1W7 72 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 SOCS3O14543 225 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 LHBP01229 141 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 IGLV3-1P01715 115 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 IGLV3-25P01717 112 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 CNFNQ9BYD5 112 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 COL5A1P20908 1838 aaPredicted RBP3.53□□□□□ -1.84
COL3A1-205ENST00000470167 FBN2P35556 2912 aa3.53□□□□□ -1.84
COL3A1-205ENST00000470167 SETD2Q9BYW2 2564 aaPredicted RBP3.53□□□□□ -1.85
COL3A1-205ENST00000470167 TANC2Q9HCD6 1990 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV3-72A0A0B4J1Y9 119 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 FXYD7P58549 80 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 ELOF1P60002 83 aaKnown RBP3.52□□□□□ -1.85
COL3A1-205ENST00000470167 NREPQ16612 68 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 ENHOQ6UWT2 76 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 Q6ZS52 159 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 Q86TA4 180 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 TENM4Q6N022 2769 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 HEATR1Q9H583 2144 aaKnown RBP3.52□□□□□ -1.85
COL3A1-205ENST00000470167 DMXL1Q9Y485 3027 aa3.52□□□□□ -1.85
COL3A1-205ENST00000470167 MDC1Q14676 2089 aaKnown RBP3.51□□□□□ -1.85
COL3A1-205ENST00000470167 ASPMQ8IZT6 3477 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV3-20A0A0C4DH32 117 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 M0R3E3 92 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 LY6HO94772 140 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 PPP1R17O96001 155 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 CTSGP08311 255 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 SAA2P0DJI9 122 aaPredicted RBP3.51□□□□□ -1.85
COL3A1-205ENST00000470167 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 CCL14Q16627 93 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 MIAQ16674 131 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 ODF3L2Q3SX64 289 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 C10orf25Q5T742 122 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 CXCL17Q6UXB2 119 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
COL3A1-205ENST00000470167 KLHL30-AS1Q8NEE0 82 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 FLVCR1-AS1Q8TAF5 88 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 LITAFQ99732 161 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 LINC00467Q9BRT7 94 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 S4R3C0 116 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 COL4A1P02462 1669 aa3.51□□□□□ -1.85
COL3A1-205ENST00000470167 MUC22E2RYF6 1773 aaPredicted RBP3.51□□□□□ -1.85
COL3A1-205ENST00000470167 TET1Q8NFU7 2136 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 COL4A2P08572 1712 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 MYO7AQ13402 2215 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 IGLV4-69A0A075B6H9 119 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 IGKV1-6A0A0C4DH72 117 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 A6NED7 52 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 KRTAP16-1A8MUX0 517 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 CCL3P10147 92 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV1-2P23083 117 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 RPS27P42677 84 aaKnown RBP3.5□□□□□ -1.85
COL3A1-205ENST00000470167 C20orf203Q8NBC4 194 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 Q9BRP9 147 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 PCNX2A6NKB5 2137 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 ARID1AO14497 2285 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 GVINP1Q7Z2Y8 2422 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 SPG11Q96JI7 2443 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 NBEAQ8NFP9 2946 aa3.5□□□□□ -1.85
COL3A1-205ENST00000470167 IGKV1D-42A0A075B6H8 117 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV3-35A0A0C4DH35 117 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 IGLV3-19P01714 112 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV3-48P01763 117 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 ROMO1P60602 79 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 C10orf128Q5T292 105 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 GON4LQ3T8J9 2241 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 COL4A5P29400 1685 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 SPTA1P02549 2419 aa3.49□□□□□ -1.85
COL3A1-205ENST00000470167 MYOFQ9NZM1 2061 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 C17orf58Q2M2W7 97 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 ZFAND2AQ8N6M9 145 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 ZCCHC13Q8WW36 166 aaKnown RBP3.48□□□□□ -1.85
COL3A1-205ENST00000470167 RPL36ALQ969Q0 106 aaKnown RBP3.48□□□□□ -1.85
COL3A1-205ENST00000470167 C14orf132Q9NPU4 83 aa3.48□□□□□ -1.85
COL3A1-205ENST00000470167 CDH23Q9H251 3354 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 IGHV4-28A0A0C4DH34 117 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 RTL8CO15255 209 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 LINC00271P0C7V0 271 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 PRB4P10163 310 aaPredicted RBP3.47□□□□□ -1.85
COL3A1-205ENST00000470167 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 HCP5Q6MZN7 132 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 NDUFA4L2Q9NRX3 87 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 DNAH14Q0VDD8 3507 aa3.47□□□□□ -1.85
COL3A1-205ENST00000470167 RP1L1Q8IWN7 2480 aaPredicted RBP3.47□□□□□ -1.85
COL3A1-205ENST00000470167 TRBV6-5A0A0K0K1A5 114 aa3.46□□□□□ -1.86
COL3A1-205ENST00000470167 CGB3P0DN86 165 aa3.46□□□□□ -1.86
COL3A1-205ENST00000470167 CGB7P0DN87 165 aa3.46□□□□□ -1.86
COL3A1-205ENST00000470167 IGHV3-30-3P0DP02 117 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms