RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 XCL2Q9UBD3 114 aa9.79□□□□□ -0.84
BRCA1-209ENST00000470026 BBC3Q96PG8 261 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-209ENST00000470026 ACACBO00763 2458 aa9.78□□□□□ -0.84
BRCA1-209ENST00000470026 COX6A2Q02221 97 aa9.78□□□□□ -0.84
BRCA1-209ENST00000470026 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
BRCA1-209ENST00000470026 UTP20O75691 2785 aaKnown RBP9.78□□□□□ -0.84
BRCA1-209ENST00000470026 HERVK_113P63121 156 aa9.77□□□□□ -0.84
BRCA1-209ENST00000470026 STHQ8IWL8 128 aa9.77□□□□□ -0.84
BRCA1-209ENST00000470026 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
BRCA1-209ENST00000470026 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
BRCA1-209ENST00000470026 NTN5Q8WTR8 489 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-209ENST00000470026 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
BRCA1-209ENST00000470026 POLQO75417 2590 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 MYO18BQ8IUG5 2567 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 K7EQD1 137 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 LINC00694P0DN24 101 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
BRCA1-209ENST00000470026 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
BRCA1-209ENST00000470026 COX6CP09669 75 aa9.75□□□□□ -0.85
BRCA1-209ENST00000470026 CKS1BP61024 79 aa9.75□□□□□ -0.85
BRCA1-209ENST00000470026 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
BRCA1-209ENST00000470026 ZNF843Q8N446 348 aa9.75□□□□□ -0.85
BRCA1-209ENST00000470026 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
BRCA1-209ENST00000470026 H3BT86 120 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 H7C423 109 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 CCL24O00175 119 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 LST1O00453 97 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 Q6ZTI0 123 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 PPDPFQ9H3Y8 114 aa9.74□□□□□ -0.85
BRCA1-209ENST00000470026 PTPN13Q12923 2485 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
BRCA1-209ENST00000470026 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 CITED2Q99967 270 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-209ENST00000470026 F5H768 121 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-209ENST00000470026 NPC2P61916 151 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 ZNF625Q96I27 306 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-209ENST00000470026 CITED1Q99966 193 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 Q9H8V8 135 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
BRCA1-209ENST00000470026 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-209ENST00000470026 FAM208BQ5VWN6 2430 aa9.72□□□□□ -0.85
BRCA1-209ENST00000470026 PLAC8L1A1L4L8 177 aa9.71□□□□□ -0.85
BRCA1-209ENST00000470026 DAND5Q8N907 189 aa9.71□□□□□ -0.85
BRCA1-209ENST00000470026 TEX49A0A1B0GTD5 131 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 CMC4P56277 68 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-209ENST00000470026 DEFB121Q5J5C9 76 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 C2orf82Q6UX34 121 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 UBE2WQ96B02 151 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 FAM110AQ9BQ89 295 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 ESM1Q9NQ30 184 aa9.71□□□□□ -0.86
BRCA1-209ENST00000470026 NDUFA7O95182 113 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 ZNF462Q96JM2 2506 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 NAV2Q8IVL1 2488 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
BRCA1-209ENST00000470026 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
BRCA1-209ENST00000470026 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 HERV-K104P63124 156 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 C19orf73Q9NVV2 129 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 GAGE4Q13068 117 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 GAGE5Q13069 117 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 NOP10Q9NPE3 64 aaKnown RBP9.68□□□□□ -0.86
BRCA1-209ENST00000470026 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
BRCA1-209ENST00000470026 MYO9AB2RTY4 2548 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 USP24Q9UPU5 2620 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
BRCA1-209ENST00000470026 AKAP9Q99996 3911 aa9.66□□□□□ -0.86
BRCA1-209ENST00000470026 FAM240AA0A1B0GVK7 77 aa9.66□□□□□ -0.86
BRCA1-209ENST00000470026 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
BRCA1-209ENST00000470026 WFDC11Q8NEX6 87 aa9.66□□□□□ -0.86
BRCA1-209ENST00000470026 COX7A2LO14548 114 aa9.65□□□□□ -0.86
BRCA1-209ENST00000470026 Q6Q795 121 aa9.65□□□□□ -0.86
BRCA1-209ENST00000470026 PRIMA1Q86XR5 153 aa9.65□□□□□ -0.86
BRCA1-209ENST00000470026 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
BRCA1-209ENST00000470026 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
BRCA1-209ENST00000470026 LINC01006Q8NI28 216 aa9.64□□□□□ -0.87
BRCA1-209ENST00000470026 UBE2L6O14933 153 aa9.63□□□□□ -0.87
BRCA1-209ENST00000470026 CRLF1O75462 422 aa9.63□□□□□ -0.87
BRCA1-209ENST00000470026 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
BRCA1-209ENST00000470026 ABCA12Q86UK0 2595 aa9.63□□□□□ -0.87
BRCA1-209ENST00000470026 ZNF469Q96JG9 3925 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-209ENST00000470026 SNCGO76070 127 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE7O76087 117 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms