RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 LECT2O14960 151 aa6.48□□□□□ -1.37
SMARCE1-207ENST00000469334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1-207ENST00000469334 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
SMARCE1-207ENST00000469334 IGKV2-28A0A075B6P5 120 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 K7EMT4 169 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 AVPP01185 164 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 IGKV2D-28P01615 120 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 BLCAPP62952 87 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 COX6A2Q02221 97 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 CFHR3Q02985 330 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 ENHOQ6UWT2 76 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 WFDC11Q8NEX6 87 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 SIRPDQ9H106 197 aa6.47□□□□□ -1.37
SMARCE1-207ENST00000469334 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.37
SMARCE1-207ENST00000469334 SS18Q15532 418 aa6.46□□□□□ -1.37
SMARCE1-207ENST00000469334 BRK1Q8WUW1 75 aa6.46□□□□□ -1.37
SMARCE1-207ENST00000469334 MOB4Q9Y3A3 225 aa6.46□□□□□ -1.37
SMARCE1-207ENST00000469334 PKDREJQ9NTG1 2253 aa6.46□□□□□ -1.38
SMARCE1-207ENST00000469334 ZZEF1O43149 2961 aa6.46□□□□□ -1.38
SMARCE1-207ENST00000469334 TECTAO75443 2155 aa6.46□□□□□ -1.38
SMARCE1-207ENST00000469334 FREM2Q5SZK8 3169 aa6.46□□□□□ -1.38
SMARCE1-207ENST00000469334 DEFB109BQ30KR1 87 aa6.46□□□□□ -1.38
SMARCE1-207ENST00000469334 MUC6Q6W4X9 2439 aa6.45□□□□□ -1.38
SMARCE1-207ENST00000469334 IGKV3-7A0A075B6H7 116 aa6.45□□□□□ -1.38
SMARCE1-207ENST00000469334 SNRPD3P62318 126 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-207ENST00000469334 LINC00482Q8N8I6 264 aa6.45□□□□□ -1.38
SMARCE1-207ENST00000469334 POLEQ07864 2286 aa6.45□□□□□ -1.38
SMARCE1-207ENST00000469334 F8WEM9 126 aa6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 LY6G6DO95868 133 aa6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 TMEM256-PLSCR3K7ERE1 68 aa6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 IGHV3-53P01767 116 aa6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 ARRDC1-AS1Q9H2J1 176 aa6.44□□□□□ -1.38
SMARCE1-207ENST00000469334 LPAL2Q16609 132 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 WFDC9Q8NEX5 89 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 ROS1P08922 2347 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 IGHV3-73A0A0B4J1V6 119 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 SAA4P35542 130 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 PROK1P58294 105 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 SPINK13Q1W4C9 94 aa6.43□□□□□ -1.38
SMARCE1-207ENST00000469334 CFAP47Q6ZTR5 3102 aa6.42□□□□□ -1.38
SMARCE1-207ENST00000469334 EDN2P20800 178 aa6.42□□□□□ -1.38
SMARCE1-207ENST00000469334 IBA57-AS1B1ANH7 110 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 ERC2-IT1O76042 136 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 RMI2Q96E14 147 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 K7EQG2 157 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 CCL18P55774 89 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 CXCL6P80162 114 aa6.41□□□□□ -1.38
SMARCE1-207ENST00000469334 TRBV6-4A0A1B0GX49 114 aa6.4□□□□□ -1.38
SMARCE1-207ENST00000469334 C1orf158Q8N1D5 194 aa6.4□□□□□ -1.38
SMARCE1-207ENST00000469334 CEP250Q9BV73 2442 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 LOC110117498A0A087WWA1 95 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 A0A0U1RQV1 116 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 A0A1W2PRX2 142 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 SLPIP03973 132 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 CDSNQ15517 529 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 Q6ZSN1 163 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 C11orf72Q8NBR9 251 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 SNURFQ9Y675 71 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 MED13LQ71F56 2210 aa6.4□□□□□ -1.39
SMARCE1-207ENST00000469334 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
SMARCE1-207ENST00000469334 IGKV3-20P01619 116 aa6.39□□□□□ -1.39
SMARCE1-207ENST00000469334 NBL1P41271 181 aa6.39□□□□□ -1.39
SMARCE1-207ENST00000469334 LINC00158P58513 81 aa6.39□□□□□ -1.39
SMARCE1-207ENST00000469334 SPTBN2O15020 2390 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 IGHV3-11P01762 117 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 MIFP14174 115 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 PLA2G2CQ5R387 149 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 Q8N814 137 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 K7EQD1 137 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 PRR15Q8IV56 129 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 Q8NA96 180 aa6.38□□□□□ -1.39
SMARCE1-207ENST00000469334 TPRP12270 2363 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 A8MTW9 85 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 PAX4O43316 350 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 PDE6GP18545 87 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 Q6ZQT0 140 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 Q9UF83 564 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 ZDBF2Q9HCK1 2354 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 DCHS1Q96JQ0 3298 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 Q96MF0 132 aa6.37□□□□□ -1.39
SMARCE1-207ENST00000469334 CACNA1HO95180 2353 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
SMARCE1-207ENST00000469334 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms