RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 WFDC10BQ8IUB3 73 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 C10orf126Q8N4M7 172 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 OR5A1Q8NGJ0 315 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 UPK3BQ9BT76 320 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 ANGP03950 147 aaKnown RBP5.57□□□□□ -1.52
HDAC6-216ENST00000468949 FGF6P10767 208 aa5.57□□□□□ -1.52
HDAC6-216ENST00000468949 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
HDAC6-216ENST00000468949 Q9H8V8 135 aa5.57□□□□□ -1.52
HDAC6-216ENST00000468949 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
HDAC6-216ENST00000468949 LYSTQ99698 3801 aa5.57□□□□□ -1.52
HDAC6-216ENST00000468949 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 ESDP10768 282 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 S100A2P29034 98 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 RPL39P62891 51 aaKnown RBP5.56□□□□□ -1.52
HDAC6-216ENST00000468949 PMCHL1Q16048 86 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 LINC01556Q5JQF7 62 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 PAPPA-AS1Q5QFB9 102 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
HDAC6-216ENST00000468949 IGKV3OR2-268A0A0C4DH90 116 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 LINC01546A6NGU7 62 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-216ENST00000468949 K7EP13 123 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 ATP5LO75964 103 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 DNAH10OSP0CZ25 163 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 RBX1P62877 108 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 C2orf88Q9BSF0 95 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 HSPB8Q9UJY1 196 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
HDAC6-216ENST00000468949 A0A1B0GUV1 79 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 LEPROTL1O95214 131 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 PDZD11Q5EBL8 140 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 CLPSL2Q6UWE3 100 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 TEX43Q6ZNM6 134 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 MRPL52Q86TS9 123 aaKnown RBP5.54□□□□□ -1.52
HDAC6-216ENST00000468949 FAM19A2Q8N3H0 131 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 Q8N976 141 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 RMI2Q96E14 147 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 TMEM141Q96I45 108 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 TIMM17AQ99595 171 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
HDAC6-216ENST00000468949 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 NPSP0C0P6 89 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 CFAP161Q6P656 301 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 Q6ZUT4 128 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 ERASQ7Z444 233 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 LINC00269Q8N2A0 174 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 ZNF664Q8N3J9 261 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 UBE2WQ96B02 151 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 VCX2Q9H322 139 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 Q9HAA7 133 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 PYGO1Q9Y3Y4 419 aa5.53□□□□□ -1.52
HDAC6-216ENST00000468949 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
HDAC6-216ENST00000468949 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 IGLV4-60A0A075B6I1 120 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 TRAV8-3A0A0A6YYJ7 113 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 NBDYA0A0U1RRE5 68 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 H0Y8G0 127 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 M0R2N4 97 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 FABP4P15090 132 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
HDAC6-216ENST00000468949 REG3AQ06141 175 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 SS18Q15532 418 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 RNASE13Q5GAN3 156 aaKnown RBP5.52□□□□□ -1.53
HDAC6-216ENST00000468949 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
HDAC6-216ENST00000468949 Q8N3U1 123 aa5.52□□□□□ -1.53
HDAC6-216ENST00000468949 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 TRAV13-1A0A0B4J241 112 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 PCP4L1A6NKN8 68 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 PSCAO43653 123 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 PRSS1P07477 247 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 LINC00310P59036 64 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 MIAQ16674 131 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 NFE4Q86UQ8 179 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 IFI27L1Q96BM0 104 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 PACRGQ96M98 296 aaPredicted RBP5.51□□□□□ -1.53
HDAC6-216ENST00000468949 C1orf43Q9BWL3 253 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 CDC42SE2Q9NRR3 84 aa5.51□□□□□ -1.53
HDAC6-216ENST00000468949 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
HDAC6-216ENST00000468949 IGKV2D-24A0A075B6R9 120 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 A0A096LNJ9 63 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 IGIPA6NJ69 53 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 NUPR1O60356 82 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 SNRPEP62304 92 aaKnown RBP5.5□□□□□ -1.53
HDAC6-216ENST00000468949 SEC11AP67812 179 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 PMVKQ15126 192 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
HDAC6-216ENST00000468949 TM2D2Q9BX73 214 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 COX11Q9Y6N1 276 aa5.5□□□□□ -1.53
HDAC6-216ENST00000468949 IGLV10-54A0A075B6I4 117 aa5.49□□□□□ -1.53
HDAC6-216ENST00000468949 TRAV8-4A0A0B4J246 113 aa5.49□□□□□ -1.53
HDAC6-216ENST00000468949 C20orf202A1L168 122 aa5.49□□□□□ -1.53
HDAC6-216ENST00000468949 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms