RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
TMEM39A-205ENST00000468676 COX19Q49B96 90 aa9.74□□□□□ -0.85
TMEM39A-205ENST00000468676 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
TMEM39A-205ENST00000468676 KRTAP26-1Q6PEX3 210 aa9.74□□□□□ -0.85
TMEM39A-205ENST00000468676 RPS10P5Q9NQ39 176 aa9.74□□□□□ -0.85
TMEM39A-205ENST00000468676 KIAA1109Q2LD37 5005 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 IGLV10-54A0A075B6I4 117 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 RAB5AP20339 215 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 FUSP35637 526 aaKnown RBP eCLIP9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 SVBPQ8N300 66 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 MAP1LC3AQ9H492 121 aa9.73□□□□□ -0.85
TMEM39A-205ENST00000468676 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 SNAPINO95295 136 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 APOC3P02656 99 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 ZNF664Q8N3J9 261 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
TMEM39A-205ENST00000468676 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-205ENST00000468676 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
TMEM39A-205ENST00000468676 UBE2D4Q9Y2X8 147 aa9.71□□□□□ -0.86
TMEM39A-205ENST00000468676 CCL25O15444 150 aa9.7□□□□□ -0.86
TMEM39A-205ENST00000468676 KRTAP10-1P60331 282 aa9.7□□□□□ -0.86
TMEM39A-205ENST00000468676 LRP1BQ9NZR2 4599 aa9.7□□□□□ -0.86
TMEM39A-205ENST00000468676 K7EMI3 77 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 MT-ND6P03923 174 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 SS18Q15532 418 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 CFAP161Q6P656 301 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 Q8N8P6 123 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
TMEM39A-205ENST00000468676 DNAH5Q8TE73 4624 aa9.68□□□□□ -0.86
TMEM39A-205ENST00000468676 LOC389332A0A1B0GUA5 103 aa9.68□□□□□ -0.86
TMEM39A-205ENST00000468676 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
TMEM39A-205ENST00000468676 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
TMEM39A-205ENST00000468676 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-205ENST00000468676 C1orf196B1AJZ1 125 aa9.67□□□□□ -0.86
TMEM39A-205ENST00000468676 HERC2O95714 4834 aa9.67□□□□□ -0.86
TMEM39A-205ENST00000468676 PRSS1P07477 247 aa9.66□□□□□ -0.86
TMEM39A-205ENST00000468676 G0S2P27469 103 aa9.66□□□□□ -0.86
TMEM39A-205ENST00000468676 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-205ENST00000468676 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-205ENST00000468676 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
TMEM39A-205ENST00000468676 RYR1P21817 5038 aa9.65□□□□□ -0.86
TMEM39A-205ENST00000468676 XCL1P47992 114 aa9.65□□□□□ -0.86
TMEM39A-205ENST00000468676 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
TMEM39A-205ENST00000468676 AP5S1Q9NUS5 200 aa9.65□□□□□ -0.86
TMEM39A-205ENST00000468676 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
TMEM39A-205ENST00000468676 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
TMEM39A-205ENST00000468676 IFI27P40305 119 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-205ENST00000468676 FOXI1Q12951 378 aa9.64□□□□□ -0.87
TMEM39A-205ENST00000468676 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
TMEM39A-205ENST00000468676 Q6ZUT4 128 aa9.64□□□□□ -0.87
TMEM39A-205ENST00000468676 CNBPP62633 177 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-205ENST00000468676 FABP9Q0Z7S8 132 aa9.63□□□□□ -0.87
TMEM39A-205ENST00000468676 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-205ENST00000468676 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
TMEM39A-205ENST00000468676 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-205ENST00000468676 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
TMEM39A-205ENST00000468676 XGP55808 180 aa9.62□□□□□ -0.87
TMEM39A-205ENST00000468676 PRSS3P2Q8NHM4 247 aa9.62□□□□□ -0.87
TMEM39A-205ENST00000468676 ALKBH7Q9BT30 221 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-205ENST00000468676 TGIF2-C20orf24A0A0A6YYL0 155 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 IGHV1-58A0A0C4DH39 117 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 NPSP0C0P6 89 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 RNASE13Q5GAN3 156 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 C2orf66Q6UXQ4 117 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 Q6ZSA8 131 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 C15orf56Q8N910 161 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 C9orf163Q8N9P6 203 aa9.61□□□□□ -0.87
TMEM39A-205ENST00000468676 HSPG2P98160 4391 aa9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 TRAPPC1Q9Y5R8 145 aa9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 APOBP04114 4563 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-205ENST00000468676 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 IFITM10A6NMD0 228 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 COX7A2LO14548 114 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 MALP21145 153 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 SLC7A5P1Q8MH63 180 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 Q8N1X5 172 aa9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-205ENST00000468676 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 PAPPA-AS1Q5QFB9 102 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 Q6ZN92 141 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 SMCO4Q9NRQ5 59 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 FAM30AQ9NZY2 134 aa9.58□□□□□ -0.88
TMEM39A-205ENST00000468676 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
TMEM39A-205ENST00000468676 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
TMEM39A-205ENST00000468676 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
TMEM39A-205ENST00000468676 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
TMEM39A-205ENST00000468676 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
TMEM39A-205ENST00000468676 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
TMEM39A-205ENST00000468676 APOMO95445 188 aa9.56□□□□□ -0.88
TMEM39A-205ENST00000468676 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
TMEM39A-205ENST00000468676 YPEL4Q96NS1 127 aa9.56□□□□□ -0.88
TMEM39A-205ENST00000468676 VCX2Q9H322 139 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms