RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
SNIP1-202ENST00000468040 C1orf134Q5TEV5 83 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 NFE4Q86UQ8 179 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 UBE2WQ96B02 151 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
SNIP1-202ENST00000468040 HSBP1O75506 76 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 HBDP02042 147 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 NPSP0C0P6 89 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
SNIP1-202ENST00000468040 REG3AQ06141 175 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 MIAQ16674 131 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 RMI2Q96E14 147 aa10.23□□□□□ -0.77
SNIP1-202ENST00000468040 SERF1AO75920 110 aa10.22□□□□□ -0.77
SNIP1-202ENST00000468040 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
SNIP1-202ENST00000468040 ENHOQ6UWT2 76 aa10.22□□□□□ -0.77
SNIP1-202ENST00000468040 TIMM17AQ99595 171 aa10.22□□□□□ -0.77
SNIP1-202ENST00000468040 Q9HAA7 133 aa10.22□□□□□ -0.77
SNIP1-202ENST00000468040 IGIPA6NJ69 53 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 Q6ZN92 141 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 Q6ZUT4 128 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 ERASQ7Z444 233 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 SCGB3A1Q96QR1 104 aa10.21□□□□□ -0.77
SNIP1-202ENST00000468040 SACSQ9NZJ4 4579 aa10.21□□□□□ -0.78
SNIP1-202ENST00000468040 KMT2CQ8NEZ4 4911 aaKnown RBP10.2□□□□□ -0.78
SNIP1-202ENST00000468040 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 A0A096LNJ9 63 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 TM2D2Q9BX73 214 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
SNIP1-202ENST00000468040 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
SNIP1-202ENST00000468040 LINC00310P59036 64 aa10.19□□□□□ -0.78
SNIP1-202ENST00000468040 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
SNIP1-202ENST00000468040 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
SNIP1-202ENST00000468040 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
SNIP1-202ENST00000468040 TEX43Q6ZNM6 134 aa10.18□□□□□ -0.78
SNIP1-202ENST00000468040 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
SNIP1-202ENST00000468040 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
SNIP1-202ENST00000468040 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
SNIP1-202ENST00000468040 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.17□□□□□ -0.78
SNIP1-202ENST00000468040 CCL25O15444 150 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 ATP5LO75964 103 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 SS18Q15532 418 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
SNIP1-202ENST00000468040 VCX2Q9H322 139 aa10.17□□□□□ -0.78
SNIP1-202ENST00000468040 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
SNIP1-202ENST00000468040 PSCAO43653 123 aa10.16□□□□□ -0.78
SNIP1-202ENST00000468040 NDUFA6P56556 154 aa10.16□□□□□ -0.78
SNIP1-202ENST00000468040 Q6ZRN7 208 aaPredicted RBP10.16□□□□□ -0.78
SNIP1-202ENST00000468040 FAM19A2Q8N3H0 131 aa10.16□□□□□ -0.78
SNIP1-202ENST00000468040 HYDINQ4G0P3 5121 aa10.16□□□□□ -0.78
SNIP1-202ENST00000468040 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.78
SNIP1-202ENST00000468040 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.78
SNIP1-202ENST00000468040 NUPR1O60356 82 aa10.15□□□□□ -0.78
SNIP1-202ENST00000468040 AMELXQ99217 191 aa10.15□□□□□ -0.78
SNIP1-202ENST00000468040 KMT2AQ03164 3969 aa10.15□□□□□ -0.79
SNIP1-202ENST00000468040 RTL8CO15255 209 aa10.14□□□□□ -0.79
SNIP1-202ENST00000468040 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
SNIP1-202ENST00000468040 DNAH6Q9C0G6 4158 aa10.14□□□□□ -0.79
SNIP1-202ENST00000468040 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
SNIP1-202ENST00000468040 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
SNIP1-202ENST00000468040 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
SNIP1-202ENST00000468040 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
SNIP1-202ENST00000468040 HSPB8Q9UJY1 196 aa10.13□□□□□ -0.79
SNIP1-202ENST00000468040 RYR2Q92736 4967 aa10.12□□□□□ -0.79
SNIP1-202ENST00000468040 XCL1P47992 114 aa10.12□□□□□ -0.79
SNIP1-202ENST00000468040 PMVKQ15126 192 aa10.12□□□□□ -0.79
SNIP1-202ENST00000468040 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
SNIP1-202ENST00000468040 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
SNIP1-202ENST00000468040 UBE2D1P51668 147 aa10.11□□□□□ -0.79
SNIP1-202ENST00000468040 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
SNIP1-202ENST00000468040 CD164L2Q6UWJ8 174 aa10.11□□□□□ -0.79
SNIP1-202ENST00000468040 CST9LQ9H4G1 147 aa10.11□□□□□ -0.79
SNIP1-202ENST00000468040 S100A6P06703 90 aa10.1□□□□□ -0.79
SNIP1-202ENST00000468040 SEC11AP67812 179 aa10.1□□□□□ -0.79
SNIP1-202ENST00000468040 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
SNIP1-202ENST00000468040 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
SNIP1-202ENST00000468040 PRSS1P07477 247 aa10.09□□□□□ -0.79
SNIP1-202ENST00000468040 FOXI1Q12951 378 aa10.09□□□□□ -0.79
SNIP1-202ENST00000468040 LINC00242Q5T6M2 205 aa10.09□□□□□ -0.79
SNIP1-202ENST00000468040 MAPKAPK5-AS1Q8N8E1 139 aa10.09□□□□□ -0.79
SNIP1-202ENST00000468040 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
SNIP1-202ENST00000468040 FABP4P15090 132 aa10.08□□□□□ -0.8
SNIP1-202ENST00000468040 TNP2Q05952 138 aa10.08□□□□□ -0.8
SNIP1-202ENST00000468040 FAM19A3Q7Z5A8 133 aa10.08□□□□□ -0.8
SNIP1-202ENST00000468040 EREGO14944 169 aa10.07□□□□□ -0.8
SNIP1-202ENST00000468040 A0A087WTM6 91 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 LRCOL1A6NCL2 159 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 COX7A2LO14548 114 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 HERVK_113P63121 156 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
SNIP1-202ENST00000468040 MAP1LC3CQ9BXW4 147 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms