RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 C9orf153Q5TBE3 101 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 TEN1Q86WV5 123 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 C10orf126Q8N4M7 172 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 CARD19Q96LW7 228 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 CSMD3Q7Z407 3707 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 M0R381 172 aa4.9□□□□□ -1.62
SCAF4-204ENST00000467731 DAZ2Q13117 558 aaKnown RBP4.9□□□□□ -1.62
SCAF4-204ENST00000467731 ZNF876PQ49A33 203 aa4.9□□□□□ -1.62
SCAF4-204ENST00000467731 SPANXN1Q5VSR9 72 aa4.9□□□□□ -1.62
SCAF4-204ENST00000467731 CHCHD1Q96BP2 118 aaKnown RBP4.9□□□□□ -1.62
SCAF4-204ENST00000467731 A0A0J9YWU9 116 aa4.9□□□□□ -1.63
SCAF4-204ENST00000467731 M0R2P5 195 aa4.9□□□□□ -1.63
SCAF4-204ENST00000467731 CNFNQ9BYD5 112 aa4.9□□□□□ -1.63
SCAF4-204ENST00000467731 TRGV1A0A0A0MS02 117 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 A0A1B0GUT8 65 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 FAM222AQ5U5X8 452 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 Q6ZTI0 123 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 SPANXDQ9BXN6 97 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 CELA1Q9UNI1 258 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 SMCPP49901 116 aaPredicted RBP4.89□□□□□ -1.63
SCAF4-204ENST00000467731 FXYD2P54710 66 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 C11orf68Q9H3H3 251 aaKnown RBP4.89□□□□□ -1.63
SCAF4-204ENST00000467731 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 TWIST1Q15672 202 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 LGALS9BQ3B8N2 356 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 Q5XG85 94 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 JPT2Q9H910 190 aa4.89□□□□□ -1.63
SCAF4-204ENST00000467731 LYRM9A8MSI8 78 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 UQCRQO14949 82 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 NXPH4O95158 308 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 DEFB130BP0DP73 79 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 DEFB130AP0DP74 79 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 CACNG7P62955 275 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 LINC00173Q6ZV60 143 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
SCAF4-204ENST00000467731 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 IGHV1-24A0A0C4DH33 117 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 LINC00526Q96FQ7 95 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 LYSTQ99698 3801 aa4.88□□□□□ -1.63
SCAF4-204ENST00000467731 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 K7ERJ3 54 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 SPART-AS1P0CW21 52 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 RIGQ13278 110 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 ATP5L2Q7Z4Y8 100 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 CHCHD5Q9BSY4 110 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 A0A087WWL8 130 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 A0A1B0GXF2 115 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 HBBP68871 147 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 LINC00612Q8N6U2 182 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 C14orf178Q8N769 122 aaPredicted RBP4.87□□□□□ -1.63
SCAF4-204ENST00000467731 POM121L12Q8N7R1 296 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 URB1-AS1Q96HZ7 61 aa4.87□□□□□ -1.63
SCAF4-204ENST00000467731 DAD1P61803 113 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 IGHV3-73A0A0B4J1V6 119 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 A8MWV9 139 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 IGHV3-53P01767 116 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 C12orf74Q32Q52 190 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 LINC00336Q6ZUF6 198 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 CEND1Q8N111 149 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 C11orf45Q8TAV5 145 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 U3KQK5 164 aa4.86□□□□□ -1.63
SCAF4-204ENST00000467731 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
SCAF4-204ENST00000467731 TAL2Q16559 108 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 KIF25-AS1Q9Y6Z4 181 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 Q6ZTC4 211 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 AMN1Q8IY45 258 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 DPH3P1Q9H4G8 78 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 KLK5Q9Y337 293 aaPredicted RBP4.85□□□□□ -1.63
SCAF4-204ENST00000467731 STARD9Q9P2P6 4700 aa4.85□□□□□ -1.63
SCAF4-204ENST00000467731 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 LINC00315P59091 139 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 C15orf53Q8NAA6 179 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 ATP5G1P05496 136 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 MGPP08493 103 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 ZNF56Q15929 161 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 FAM104BQ5XKR9 115 aa4.84□□□□□ -1.63
SCAF4-204ENST00000467731 TRAV26-2A0A0B4J265 109 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 F5H697 171 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 CRYGAP11844 174 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 HTN3P15516 51 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 ZFP2Q6ZN57 461 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 CHAC1Q9BUX1 264 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 PYGO1Q9Y3Y4 419 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 TMEM258P61165 79 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms