RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PAX4O43316 350 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 RHOHQ15669 191 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 TMEM141Q96I45 108 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 KIR2DL4Q99706 377 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
DDX56-208ENST00000467318 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
DDX56-208ENST00000467318 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
DDX56-208ENST00000467318 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
DDX56-208ENST00000467318 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
DDX56-208ENST00000467318 TRAV8-6A0A0B4J262 113 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 IGLL5B9A064 214 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 K7EQD1 137 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 TCTAP57738 103 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 TM2D2Q9BX73 214 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 A0A0J9YY99 117 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 Q6ZSN1 163 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
DDX56-208ENST00000467318 CSMD3Q7Z407 3707 aa10.3□□□□□ -0.76
DDX56-208ENST00000467318 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
DDX56-208ENST00000467318 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
DDX56-208ENST00000467318 CEND1Q8N111 149 aa10.3□□□□□ -0.76
DDX56-208ENST00000467318 M0QY20 66 aa10.29□□□□□ -0.76
DDX56-208ENST00000467318 GCSHP23434 173 aa10.29□□□□□ -0.76
DDX56-208ENST00000467318 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
DDX56-208ENST00000467318 OR5A1Q8NGJ0 315 aa10.29□□□□□ -0.76
DDX56-208ENST00000467318 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
DDX56-208ENST00000467318 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 H3BUT2 72 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 GYPEP15421 78 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
DDX56-208ENST00000467318 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 E9PLD3 99 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 K7EP34 96 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 FABP2P12104 132 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 HERVK_113P61574 105 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
DDX56-208ENST00000467318 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
DDX56-208ENST00000467318 A0A1W2PPM0 123 aa10.27□□□□□ -0.77
DDX56-208ENST00000467318 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
DDX56-208ENST00000467318 PMVKQ15126 192 aa10.27□□□□□ -0.77
DDX56-208ENST00000467318 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
DDX56-208ENST00000467318 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
DDX56-208ENST00000467318 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
DDX56-208ENST00000467318 P0DMU3 169 aa10.26□□□□□ -0.77
DDX56-208ENST00000467318 FAM231AP0DMU4 169 aa10.26□□□□□ -0.77
DDX56-208ENST00000467318 FAM231CP0DMU5 169 aa10.26□□□□□ -0.77
DDX56-208ENST00000467318 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
DDX56-208ENST00000467318 A0A096LPF7 62 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 HIST1H4GQ99525 98 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 CST9LQ9H4G1 147 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 Q9UF83 564 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 TNFRSF18Q9Y5U5 241 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 FXYD2P54710 66 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 NEGR1Q7Z3B1 354 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 ZNRF2Q8NHG8 242 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 RAB37Q96AX2 223 aa10.25□□□□□ -0.77
DDX56-208ENST00000467318 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
DDX56-208ENST00000467318 K7ERU9 68 aa10.24□□□□□ -0.77
DDX56-208ENST00000467318 GAGE4Q13068 117 aa10.24□□□□□ -0.77
DDX56-208ENST00000467318 GAGE5Q13069 117 aa10.24□□□□□ -0.77
DDX56-208ENST00000467318 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
DDX56-208ENST00000467318 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
DDX56-208ENST00000467318 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
DDX56-208ENST00000467318 SPCS1Q9Y6A9 102 aa10.23□□□□□ -0.77
DDX56-208ENST00000467318 I3L3M4 83 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 UBE2D3P61077 147 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 UBE2D2P62837 147 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 OCIAD2Q56VL3 154 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 A6NJY4 79 aa10.22□□□□□ -0.77
DDX56-208ENST00000467318 DAZ4Q86SG3 579 aaKnown RBP10.22□□□□□ -0.77
DDX56-208ENST00000467318 DAZ3Q9NR90 486 aaKnown RBP10.22□□□□□ -0.77
DDX56-208ENST00000467318 NHP2Q9NX24 153 aaKnown RBP10.22□□□□□ -0.77
DDX56-208ENST00000467318 TENM2Q9NT68 2774 aa10.21□□□□□ -0.77
DDX56-208ENST00000467318 RBX1P62877 108 aa10.21□□□□□ -0.78
DDX56-208ENST00000467318 TSHBP01222 138 aa10.2□□□□□ -0.78
DDX56-208ENST00000467318 CCL18P55774 89 aa10.2□□□□□ -0.78
DDX56-208ENST00000467318 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
DDX56-208ENST00000467318 DYNC2H1Q8NCM8 4307 aaKnown RBP10.2□□□□□ -0.78
DDX56-208ENST00000467318 A0A1B0GWB2 263 aa10.19□□□□□ -0.78
DDX56-208ENST00000467318 ZNF815PA8K554 130 aa10.19□□□□□ -0.78
DDX56-208ENST00000467318 TIRAPP58753 221 aa10.19□□□□□ -0.78
DDX56-208ENST00000467318 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
DDX56-208ENST00000467318 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
DDX56-208ENST00000467318 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
DDX56-208ENST00000467318 ESRGQ1W209 222 aa10.18□□□□□ -0.78
DDX56-208ENST00000467318 SCGB1D4Q6XE38 83 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms