RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 E7EUB6 86 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 DEFB109BQ30KR1 87 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 SPTSSBQ8NFR3 76 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-212ENST00000466845 PRO1854Q9UHT4 67 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 ZNF462Q96JM2 2506 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 SPTA1P02549 2419 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 LAMA5O15230 3695 aa3.82□□□□□ -1.8
LRCH3-212ENST00000466845 COL6A6A6NMZ7 2263 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 BPTFQ12830 3046 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 IGLV3-32A0A0A0MS00 114 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 TRAV22A0A0B4J277 110 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 IGHV7-4-1A0A0J9YVY3 117 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 TEX49A0A1B0GTD5 131 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 TMEM30CPA0ZSE6 113 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 SMIM1B2RUZ4 78 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 F8WEM9 126 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 CCL22O00626 93 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 MIFP14174 115 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 ZNF22P17026 224 aaPredicted RBP3.81□□□□□ -1.8
LRCH3-212ENST00000466845 SNRPGP62308 76 aaKnown RBP3.81□□□□□ -1.8
LRCH3-212ENST00000466845 MIAQ16674 131 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
LRCH3-212ENST00000466845 Q8N6K4 173 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 Q8NDZ9 215 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 LITAFQ99732 161 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 PIEZO2Q9H5I5 2752 aa3.81□□□□□ -1.8
LRCH3-212ENST00000466845 ZNF407Q9C0G0 2248 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 TRBV25-1A0A075B6N4 114 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 CEBPZOSA8MTT3 80 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 A8MWP4 228 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 IFI27P40305 119 aaPredicted RBP3.8□□□□□ -1.8
LRCH3-212ENST00000466845 UBE2D1P51668 147 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 ROMO1P60602 79 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 C1orf134Q5TEV5 83 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 Q5VV11 94 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 HELZ2Q9BYK8 2649 aaKnown RBP3.8□□□□□ -1.8
LRCH3-212ENST00000466845 KALRNO60229 2985 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
LRCH3-212ENST00000466845 CELSR3Q9NYQ7 3312 aa3.8□□□□□ -1.8
LRCH3-212ENST00000466845 CFAP46Q8IYW2 2715 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 IGKV3D-15A0A087WSY6 115 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 TRBV10-3A0A0K0K1G6 114 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 C17orf51A8MQB3 221 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 K7ERS5 55 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 LECT2O14960 151 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 PLGLAQ15195 96 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 ZNF826PQ6ZT77 177 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 ZNF563Q8TA94 476 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 TMEM190Q8WZ59 177 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 GFRA4Q9GZZ7 299 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 PSENENQ9NZ42 101 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 UBE2D4Q9Y2X8 147 aa3.79□□□□□ -1.8
LRCH3-212ENST00000466845 TLN1Q9Y490 2541 aaKnown RBP3.79□□□□□ -1.8
LRCH3-212ENST00000466845 MGAQ8IWI9 3026 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 IGLV3-16A0A075B6K0 115 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 IGHV3-49A0A0A0MS15 119 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 TMEM223A0PJW6 202 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 A6NED7 52 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 A6NIN4 97 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 LY6HO94772 140 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 PPYP01298 95 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 IGKV1D-33P01593 117 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 IGKV1-33P01594 117 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 PRB4P10163 310 aaPredicted RBP3.78□□□□□ -1.8
LRCH3-212ENST00000466845 RPL28P46779 137 aaKnown RBP3.78□□□□□ -1.8
LRCH3-212ENST00000466845 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 ATXN8Q156A1 80 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 DEFB110Q30KQ9 67 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 GDF5OSQ5U4N7 250 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 CLECL1Q8IZS7 167 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 SMG1Q96Q15 3661 aaKnown RBP3.78□□□□□ -1.8
LRCH3-212ENST00000466845 MYO18BQ8IUG5 2567 aa3.78□□□□□ -1.8
LRCH3-212ENST00000466845 MED13Q9UHV7 2174 aa3.78□□□□□ -1.81
LRCH3-212ENST00000466845 LOC400499M0QZD8 3231 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 SVILO95425 2214 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 IGLV1-50A0A075B6I6 118 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 TRAV1-2A0A0B4J238 106 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 IGHV3-66A0A0C4DH42 116 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 A8MU10 97 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 IGLV1-44P01699 117 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 TRGV3P03979 118 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 MOBPQ13875 183 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 MUC4Q99102 2169 aa3.77□□□□□ -1.81
LRCH3-212ENST00000466845 FLNBO75369 2602 aaKnown RBP3.76□□□□□ -1.81
LRCH3-212ENST00000466845 ATMQ13315 3056 aa3.76□□□□□ -1.81
LRCH3-212ENST00000466845 LINC01549A6NIU2 74 aa3.76□□□□□ -1.81
LRCH3-212ENST00000466845 CLPSP04118 112 aa3.76□□□□□ -1.81
LRCH3-212ENST00000466845 PATE4P0C8F1 98 aa3.76□□□□□ -1.81
LRCH3-212ENST00000466845 IGLV3-21P80748 117 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms