RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 I3L3M4 83 aa5.86□□□□□ -1.47
DDR1-242ENST00000465966 UBE2D3P61077 147 aa5.86□□□□□ -1.47
DDR1-242ENST00000465966 UBE2D2P62837 147 aa5.86□□□□□ -1.47
DDR1-242ENST00000465966 RPL36AP83881 106 aaKnown RBP5.86□□□□□ -1.47
DDR1-242ENST00000465966 JOSD1Q15040 202 aaPredicted RBP5.86□□□□□ -1.47
DDR1-242ENST00000465966 NFE4Q86UQ8 179 aa5.86□□□□□ -1.47
DDR1-242ENST00000465966 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
DDR1-242ENST00000465966 KIR2DL4Q99706 377 aa5.86□□□□□ -1.47
DDR1-242ENST00000465966 TRBV7-3A0A075B6L6 115 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 SIVA1O15304 175 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 SMR3BP02814 79 aaPredicted RBP5.85□□□□□ -1.47
DDR1-242ENST00000465966 CRYBA4P53673 196 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 LINC00518Q8N0U6 118 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 TOMM6Q96B49 74 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
DDR1-242ENST00000465966 SYS1-DBNDD2H3BUS1 97 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
DDR1-242ENST00000465966 KRTAP10-1P60331 282 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.47
DDR1-242ENST00000465966 Q6ZRN7 208 aaPredicted RBP5.84□□□□□ -1.47
DDR1-242ENST00000465966 C20orf203Q8NBC4 194 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 C12orf57Q99622 126 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 PRADC1Q9BSG0 188 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 CHCHD7Q9BUK0 85 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 PRO0255Q9UI72 69 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
DDR1-242ENST00000465966 TRAV9-2A0A087WT02 112 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 H0Y8G0 127 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 GYPEP15421 78 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 GCSHP23434 173 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 COTL1Q14019 142 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 MAP1LC3CQ9BXW4 147 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
DDR1-242ENST00000465966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
DDR1-242ENST00000465966 A0A087WTM6 91 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 A0A096LPF7 62 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
DDR1-242ENST00000465966 PAX4O43316 350 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 SCGB1D1O95968 90 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 PET117Q6UWS5 81 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
DDR1-242ENST00000465966 SCGB3A1Q96QR1 104 aa5.82□□□□□ -1.48
DDR1-242ENST00000465966 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
DDR1-242ENST00000465966 IGIPA6NJ69 53 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 ATP5LO75964 103 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 LINC01545Q5VT33 79 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
DDR1-242ENST00000465966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.8□□□□□ -1.48
DDR1-242ENST00000465966 K7EP13 123 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 DNAH10OSP0CZ25 163 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 G0S2P27469 103 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 ODF1Q14990 250 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 ERASQ7Z444 233 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 BAALCQ8WXS3 180 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 FAM104AQ969W3 186 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 UBE2D4Q9Y2X8 147 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 ICOSQ9Y6W8 199 aa5.8□□□□□ -1.48
DDR1-242ENST00000465966 IGLV4-3A0A075B6K6 122 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 C20orf202A1L168 122 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 ZC2HC1BQ5TFG8 222 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 Q6ZN92 141 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 ATP6V0E2Q8NHE4 81 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 TMEM141Q96I45 108 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
DDR1-242ENST00000465966 GTSF1LQ9H1H1 148 aa5.79□□□□□ -1.48
DDR1-242ENST00000465966 TRBV25-1A0A075B6N4 114 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 A0A087WX48 190 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 IGLV5-52A0A0A0MRZ9 124 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 TRBV6-8A0A0A6YYG3 113 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 TRAV12-1A0A0B4J245 112 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
DDR1-242ENST00000465966 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
DDR1-242ENST00000465966 PRSS1P07477 247 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 Q6ZUT4 128 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 NTN5Q8WTR8 489 aaPredicted RBP5.78□□□□□ -1.48
DDR1-242ENST00000465966 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 SPANXA1Q9NS26 97 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 PYGO1Q9Y3Y4 419 aa5.78□□□□□ -1.48
DDR1-242ENST00000465966 FGF6P10767 208 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 HAMPP81172 84 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
DDR1-242ENST00000465966 TMEM97Q5BJF2 176 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 RNASE13Q5GAN3 156 aaKnown RBP5.77□□□□□ -1.49
DDR1-242ENST00000465966 LYPD5Q6UWN5 251 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 MRPL52Q86TS9 123 aaKnown RBP5.77□□□□□ -1.49
DDR1-242ENST00000465966 VAMP8Q9BV40 100 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 TIMM21Q9BVV7 248 aa5.77□□□□□ -1.49
DDR1-242ENST00000465966 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
DDR1-242ENST00000465966 FAT1Q14517 4588 aa5.76□□□□□ -1.49
DDR1-242ENST00000465966 IGLV4-69A0A075B6H9 119 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms