RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NPVFQ9HCQ7 196 aa-0.4□□□□□ -2.47
SMC4-205ENST00000465563 RIMS1Q86UR5 1692 aaKnown RBP-0.4□□□□□ -2.47
SMC4-205ENST00000465563 FLNAP21333 2647 aaKnown RBP-0.41□□□□□ -2.47
SMC4-205ENST00000465563 TRAV22A0A0B4J277 110 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 LOC100130705A0A1B0GUX0 176 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 I3L2K1 104 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 Q8IZM0 81 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 SMIM4Q8WVI0 70 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 NAA60Q9H7X0 242 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 HSPG2P98160 4391 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 ROBO1Q9Y6N7 1651 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 MAP1BP46821 2468 aaKnown RBP-0.41□□□□□ -2.48
SMC4-205ENST00000465563 WNK1Q9H4A3 2382 aa-0.41□□□□□ -2.48
SMC4-205ENST00000465563 ZANQ9Y493 2812 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 PIGBOS1A0A0B4J2F0 54 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 SPRR2DP22532 72 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 DEFB109BQ30KR1 87 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 NDUFA4L2Q9NRX3 87 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 SPCS1Q9Y6A9 102 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 V9GYH0 126 aa-0.42□□□□□ -2.48
SMC4-205ENST00000465563 CTXND1A0A1B0GTU2 59 aa-0.43□□□□□ -2.48
SMC4-205ENST00000465563 HAMPP81172 84 aa-0.43□□□□□ -2.48
SMC4-205ENST00000465563 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.43□□□□□ -2.48
SMC4-205ENST00000465563 LPAP08519 4548 aa-0.43□□□□□ -2.48
SMC4-205ENST00000465563 BTAF1O14981 1849 aa-0.43□□□□□ -2.48
SMC4-205ENST00000465563 DCHS2Q6V1P9 2916 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 SPTA1P02549 2419 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 ERCC6L2Q5T890 1561 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 TNXBP22105 4242 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 CPSF1Q10570 1443 aaKnown RBP-0.44□□□□□ -2.48
SMC4-205ENST00000465563 PRM1P04553 51 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 HMGN1P05114 100 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 SPRR1AP35321 89 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 Q56UQ5 140 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 SPANXDQ9BXN6 97 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 TP53AIP1Q9HCN2 124 aa-0.44□□□□□ -2.48
SMC4-205ENST00000465563 FAT2Q9NYQ8 4349 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 PAPPAQ13219 1627 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 TRBV7-3A0A075B6L6 115 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 FAM25AB3EWG3 89 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 FAM25CB3EWG5 89 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 FAM25GB3EWG6 89 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 FGF7P21781 194 aa-0.45□□□□□ -2.48
SMC4-205ENST00000465563 PDZD2O15018 2839 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 MYOM1P52179 1685 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 TSLPQ969D9 159 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 PPP3R2Q96LZ3 170 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 MGST2Q99735 147 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 PIEZO2Q9H5I5 2752 aa-0.46□□□□□ -2.48
SMC4-205ENST00000465563 C10orf71Q711Q0 1435 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 TSC2P49815 1807 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 ARHGEF5Q12774 1597 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 COX17Q14061 63 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 KRTAP20-2Q3LI61 65 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 TMEM170BQ5T4T1 132 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 BAGE2Q86Y30 109 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 DYNLRB1Q9NP97 96 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 LINC01558Q9Y6Z2 57 aa-0.47□□□□□ -2.48
SMC4-205ENST00000465563 URB1O60287 2271 aaKnown RBP-0.48□□□□□ -2.49
SMC4-205ENST00000465563 APC2O95996 2303 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 IGLC7A0M8Q6 106 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 MIF4GDA9UHW6 222 aaKnown RBP-0.48□□□□□ -2.49
SMC4-205ENST00000465563 F8VRH5 84 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 UQCR11O14957 56 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 KRTAP19-8Q3LI54 63 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 C1orf54Q8WWF1 131 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 FAM107BQ9H098 131 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 NF1P21359 2839 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 A2ML1A8K2U0 1454 aa-0.48□□□□□ -2.49
SMC4-205ENST00000465563 ALMS1Q8TCU4 4167 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 SETXQ7Z333 2677 aaKnown RBP-0.49□□□□□ -2.49
SMC4-205ENST00000465563 RAPGEF6Q8TEU7 1601 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 BSNQ9UPA5 3926 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 NALCNQ8IZF0 1738 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 CREBBPQ92793 2442 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 HERC1Q15751 4861 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 HMGN4O00479 90 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 CATR1Q13166 79 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 Q6JHZ5 121 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 C5orf38Q86SI9 138 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 TSC22D3Q99576 134 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 LINC00474Q9P2X8 69 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 NAIPQ13075 1403 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 CUL7Q14999 1698 aa-0.49□□□□□ -2.49
SMC4-205ENST00000465563 ATRQ13535 2644 aa-0.5□□□□□ -2.49
SMC4-205ENST00000465563 TENM2Q9NT68 2774 aa-0.5□□□□□ -2.49
SMC4-205ENST00000465563 APOC2P02655 101 aa-0.5□□□□□ -2.49
SMC4-205ENST00000465563 TPPP2P59282 170 aa-0.5□□□□□ -2.49
SMC4-205ENST00000465563 COMMD6Q7Z4G1 85 aa-0.5□□□□□ -2.49
SMC4-205ENST00000465563 C8orf59Q8N0T1 100 aaPredicted RBP-0.5□□□□□ -2.49
SMC4-205ENST00000465563 SSSCA1O60232 199 aa-0.51□□□□□ -2.49
SMC4-205ENST00000465563 S100A3P33764 101 aa-0.51□□□□□ -2.49
SMC4-205ENST00000465563 NBEAL1Q6ZS30 2694 aa-0.51□□□□□ -2.49
SMC4-205ENST00000465563 CHD8Q9HCK8 2581 aa-0.51□□□□□ -2.49
SMC4-205ENST00000465563 KMT2CQ8NEZ4 4911 aaKnown RBP-0.52□□□□□ -2.49
SMC4-205ENST00000465563 TET3O43151 1660 aa-0.52□□□□□ -2.49
SMC4-205ENST00000465563 HECTD4Q9Y4D8 3996 aa-0.52□□□□□ -2.49
SMC4-205ENST00000465563 OOSP1A8MZH6 123 aa-0.52□□□□□ -2.49
SMC4-205ENST00000465563 PP6455Q8WZ26 134 aa-0.52□□□□□ -2.49
SMC4-205ENST00000465563 DNAJC13O75165 2243 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms