RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	LAGE3	Q14657	143 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	SCGB1D4	Q6XE38	83 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	ZNF826P	Q6ZT77	177 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	LINC00311	Q8N616	119 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	LINC01006	Q8NI28	216 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	TSKU	Q8WUA8	353 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	H1FX	Q92522	213 aa	Known RBP	3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	PARP12	Q9H0J9	701 aa	Known RBP	3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	ZNF286A	Q9HBT8	521 aa		3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.42	□□□□□ -1.86
CACNA1C-223	ENST00000465278	RBAKDN	A6NC62	111 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	CRYM-AS1	A6NIL9	109 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	SMKR1	H3BMG3	65 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278		H3BT86	120 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	LGALS9	O00182	355 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	SDCBP	O00560	298 aa	Predicted RBP	3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	PPY	P01298	95 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	IGKC	P01834	107 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	INSL3	P51460	131 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	DAD1	P61803	113 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	CCL8	P80075	99 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	C14orf178	Q8N769	122 aa	Predicted RBP	3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	LRRC29	Q8WV35	223 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	C16orf95	Q9H693	158 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	OTOR	Q9NRC9	128 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	IL36B	Q9NZH7	164 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	ARL2-SNX15	V9GYD0	113 aa		3.41	□□□□□ -1.86
CACNA1C-223	ENST00000465278	ARHGAP32	A7KAX9	2087 aa		3.4	□□□□□ -1.86
CACNA1C-223	ENST00000465278	IGKV1D-13	A0A0B4J2D9	117 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGHV1-58	A0A0C4DH39	117 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LOC100131303	A0A0U1RQF7	123 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TMEM30CP	A0ZSE6	113 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	PLAC8L1	A1L4L8	177 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	GRIFIN	A4D1Z8	144 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	KRTAP9-6	A8MVA2	160 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGKV1-13	P0DP09	117 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SUB1	P53999	127 aa	Known RBP eCLIP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	APOC4	P55056	127 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	HIST1H4A	P62805	103 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	RPL30	P62888	115 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DAZ2	Q13117	558 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TMEM170B	Q5T4T1	132 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DAZ4	Q86SG3	579 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	RNF182	Q8N6D2	247 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LY6G5B	Q8NDX9	201 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGF2BP2-AS1	Q96M15	143 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	GAFA1	Q96PS6	74 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	FAM103A1	Q9BTL3	118 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DAZ3	Q9NR90	486 aa	Known RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	PKHD1L1	Q86WI1	4243 aa		3.4	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRAV2	A0A0B4J234	112 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRAV8-2	A0A0B4J237	113 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	MDFIC2	A0A1B0GVS7	189 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	C12orf77	C9JDV5	145 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278		F2Z2F3	143 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	NDUFS5	O43920	106 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	BCE1	O60756	84 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CD7	P09564	240 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CSN1S1	P47710	185 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF137P	P52743	207 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CCL20	P78556	96 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LELP1	Q5T871	98 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	EBLN2	Q6P2I7	272 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF493	Q6ZR52	646 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF818P	Q6ZRF7	136 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	EEF1AKMT3	Q96AZ1	226 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	FAM19A4	Q96LR4	140 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRGV9	Q99603	122 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SLC25A2	Q9BXI2	301 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	C11orf1	Q9H5F2	150 aa		3.39	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRAV8-4	A0A0B4J246	113 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	NDUFB3	O43676	98 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UBE2L3	P68036	154 aa	Known RBP	3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ERCC8	Q13216	396 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TMEM155	Q4W5P6	130 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LGALS9C	Q6DKI2	356 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LINC00305	Q7Z4B0	112 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	KTN1-AS1	Q86SY8	53 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LINC00643	Q86TS7	51 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	KRTAP11-1	Q8IUC1	163 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SERP2	Q8N6R1	65 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ODF3	Q96PU9	254 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TM2D3	Q9BRN9	247 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CHAC1	Q9BUX1	264 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DPH3P1	Q9H4G8	78 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	GNG13	Q9P2W3	67 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TIMM9	Q9Y5J7	89 aa		3.38	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGHV3-64D	A0A0J9YX35	117 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UBE2L5P	A0A1B0GUS4	154 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	C17orf98	A8MV24	154 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278		C9JCJ5	164 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278		K7EMT4	169 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UPK2	O00526	184 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SYNGR2	O43760	224 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LEPROTL1	O95214	131 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TCL1B	O95988	128 aa		3.37	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms