RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
ATF3-208ENST00000465155 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
ATF3-208ENST00000465155 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
ATF3-208ENST00000465155 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
ATF3-208ENST00000465155 PKIAP61925 76 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 RBX1P62877 108 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 LINC00173Q6ZV60 143 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
ATF3-208ENST00000465155 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 PLECQ15149 4684 aaKnown RBP9.13□□□□□ -0.95
ATF3-208ENST00000465155 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
ATF3-208ENST00000465155 SIVA1O15304 175 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 CTAG1AP78358 180 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
ATF3-208ENST00000465155 LYSTQ99698 3801 aa9.13□□□□□ -0.95
ATF3-208ENST00000465155 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 ATP5LO75964 103 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
ATF3-208ENST00000465155 Q6ZUT4 128 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 PACRGQ96M98 296 aaPredicted RBP9.12□□□□□ -0.95
ATF3-208ENST00000465155 Q9H8V8 135 aa9.12□□□□□ -0.95
ATF3-208ENST00000465155 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
ATF3-208ENST00000465155 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
ATF3-208ENST00000465155 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
ATF3-208ENST00000465155 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
ATF3-208ENST00000465155 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
ATF3-208ENST00000465155 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
ATF3-208ENST00000465155 Q6ZN92 141 aa9.1□□□□□ -0.95
ATF3-208ENST00000465155 ZNF664Q8N3J9 261 aa9.1□□□□□ -0.95
ATF3-208ENST00000465155 OR10D4PQ8NGN7 298 aa9.1□□□□□ -0.95
ATF3-208ENST00000465155 NPSP0C0P6 89 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 H0Y8G0 127 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 PRSS1P07477 247 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 LGALS9CQ6DKI2 356 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 MAP1LC3CQ9BXW4 147 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 VCX2Q9H322 139 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
ATF3-208ENST00000465155 TNP2Q05952 138 aa9.08□□□□□ -0.96
ATF3-208ENST00000465155 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
ATF3-208ENST00000465155 LINC00269Q8N2A0 174 aa9.08□□□□□ -0.96
ATF3-208ENST00000465155 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
ATF3-208ENST00000465155 LY6G6CO95867 125 aa9.07□□□□□ -0.96
ATF3-208ENST00000465155 KRTDAPP60985 99 aa9.07□□□□□ -0.96
ATF3-208ENST00000465155 PYY3Q5JQD4 70 aa9.07□□□□□ -0.96
ATF3-208ENST00000465155 AMELXQ99217 191 aa9.07□□□□□ -0.96
ATF3-208ENST00000465155 C3orf79P0CE67 100 aa9.06□□□□□ -0.96
ATF3-208ENST00000465155 PMVKQ15126 192 aa9.06□□□□□ -0.96
ATF3-208ENST00000465155 TRAV9-2A0A087WT02 112 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 REG3AQ06141 175 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
ATF3-208ENST00000465155 LINC00476Q8WZB0 136 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 CRPP02741 224 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
ATF3-208ENST00000465155 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
ATF3-208ENST00000465155 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
ATF3-208ENST00000465155 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
ATF3-208ENST00000465155 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
ATF3-208ENST00000465155 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
ATF3-208ENST00000465155 LINC00587B1AMM8 73 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 IBA57-AS1B1ANH7 110 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 K7EP13 123 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 UBE2D1P51668 147 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 PET117Q6UWS5 81 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.96
ATF3-208ENST00000465155 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.96
ATF3-208ENST00000465155 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
ATF3-208ENST00000465155 NBDYA0A0U1RRE5 68 aa9.02□□□□□ -0.97
ATF3-208ENST00000465155 ODF1Q14990 250 aa9.02□□□□□ -0.97
ATF3-208ENST00000465155 TTC32Q5I0X7 151 aa9.02□□□□□ -0.97
ATF3-208ENST00000465155 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
ATF3-208ENST00000465155 SS18Q15532 418 aa9.01□□□□□ -0.97
ATF3-208ENST00000465155 MIAQ16674 131 aa9.01□□□□□ -0.97
ATF3-208ENST00000465155 Q9HAA7 133 aa9.01□□□□□ -0.97
ATF3-208ENST00000465155 MRPL35Q9NZE8 188 aaKnown RBP9.01□□□□□ -0.97
ATF3-208ENST00000465155 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms