RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CASP8AP2Q9UKL3 1982 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 CTTNBP2Q8WZ74 1663 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 NRXN2Q9P2S2 1712 aa1.86□□□□□ -2.11
PTCD3-205ENST00000464541 A0A1W2PPM0 123 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 OBSCN-AS1Q96MR7 158 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 CCL19Q99731 98 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 CHD1O14646 1710 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 STRCP1A6NGW2 1772 aa1.85□□□□□ -2.11
PTCD3-205ENST00000464541 TANC1Q9C0D5 1861 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 TCHHQ07283 1943 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 IQSEC2Q5JU85 1478 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-205ENST00000464541 CTXND1A0A1B0GTU2 59 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 F2Z2F3 143 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 CCL18P55774 89 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 HMGN3Q15651 99 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 BAGE2Q86Y30 109 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 SMIM4Q8WVI0 70 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 HIGD1BQ9P298 99 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 ERICH3Q5RHP9 1530 aa1.84□□□□□ -2.11
PTCD3-205ENST00000464541 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
PTCD3-205ENST00000464541 TET3O43151 1660 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 RREB1Q92766 1687 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 DOCK2Q92608 1830 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 M0R135 149 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 PDCD5O14737 125 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 UQCR11O14957 56 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 PI4KAP42356 2102 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 EFNA4P52798 201 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 ESPL1Q14674 2120 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 LINC00643Q86TS7 51 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 WFDC6Q9BQY6 131 aa1.83□□□□□ -2.12
PTCD3-205ENST00000464541 MRC1P22897 1456 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 INTS1Q8N201 2190 aaKnown RBP1.82□□□□□ -2.12
PTCD3-205ENST00000464541 ABCC2Q92887 1545 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 PRRC2BQ5JSZ5 2229 aaKnown RBP1.82□□□□□ -2.12
PTCD3-205ENST00000464541 TRBV30A0A0K0K1B3 111 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 A0A1B0GWA3 101 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 NCR3O14931 201 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 DEFA5Q01523 94 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 COX17Q14061 63 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 C10orf99Q6UWK7 81 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 CLTCQ00610 1675 aaKnown RBP1.82□□□□□ -2.12
PTCD3-205ENST00000464541 MON2Q7Z3U7 1717 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 PPLO60437 1756 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 MED12Q93074 2177 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 ABCA4P78363 2273 aa1.82□□□□□ -2.12
PTCD3-205ENST00000464541 DIP2CQ9Y2E4 1556 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 TOP2BQ02880 1626 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 SUPT6HQ7KZ85 1726 aaKnown RBP1.81□□□□□ -2.12
PTCD3-205ENST00000464541 RGPD4Q7Z3J3 1758 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 MGPP08493 103 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 WFDC2Q14508 124 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 FAM223AQ8IWN6 122 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 WNK3Q9BYP7 1800 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 EXPH5Q8NEV8 1989 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 ANKARQ7Z5J8 1434 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 CCDC141Q6ZP82 1450 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 EHBP1L1Q8N3D4 1523 aa1.81□□□□□ -2.12
PTCD3-205ENST00000464541 PEAK1Q9H792 1746 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 PARP14Q460N5 1801 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 A0A087WTM6 91 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 FAM223BA6NKX1 122 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 HMGN2P05204 90 aaKnown RBP1.8□□□□□ -2.12
PTCD3-205ENST00000464541 BVES-AS1Q5T3Y7 98 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 LINC01600Q96MT4 127 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 POLA1P09884 1462 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-205ENST00000464541 KIF14Q15058 1648 aa1.8□□□□□ -2.12
PTCD3-205ENST00000464541 TRAV1-2A0A0B4J238 106 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 IGLC2P0DOY2 106 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 IGLC3P0DOY3 106 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 ACYP2P14621 99 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 CFAP126Q5VTH2 177 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 DEFB119Q8N690 84 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 MAP3K4Q9Y6R4 1608 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 PSME4Q14997 1843 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 SPTBP11277 2137 aa1.79□□□□□ -2.12
PTCD3-205ENST00000464541 TET1Q8NFU7 2136 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 GBF1Q92538 1859 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 TNRC6BQ9UPQ9 1833 aaKnown RBP1.78□□□□□ -2.12
PTCD3-205ENST00000464541 MYOM1P52179 1685 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 HMGXB3Q12766 1538 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 NLRP1Q9C000 1473 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 TRGV1A0A0A0MS02 117 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 C7orf77A4D0Y5 90 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 F8WEM9 126 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 H3BUT2 72 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 LEPROTL1O95214 131 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 SPINK13Q1W4C9 94 aa1.78□□□□□ -2.12
PTCD3-205ENST00000464541 KCPQ6ZWJ8 1503 aa1.77□□□□□ -2.13
PTCD3-205ENST00000464541 D6R8Y8 96 aa1.77□□□□□ -2.13
PTCD3-205ENST00000464541 ARMS2P0C7Q2 107 aa1.77□□□□□ -2.13
PTCD3-205ENST00000464541 MUSTN1Q8IVN3 82 aa1.77□□□□□ -2.13
PTCD3-205ENST00000464541 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
PTCD3-205ENST00000464541 RGPD3A6NKT7 1758 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms