RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 C15orf54Q8N8G6 183 aa3.44□□□□□ -1.86
CD46-211ENST00000464082 DEFB104AQ8WTQ1 72 aa3.44□□□□□ -1.86
CD46-211ENST00000464082 FAM210AQ96ND0 272 aa3.44□□□□□ -1.86
CD46-211ENST00000464082 DPH3P1Q9H4G8 78 aa3.44□□□□□ -1.86
CD46-211ENST00000464082 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
CD46-211ENST00000464082 HERC1Q15751 4861 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 TRBV25-1A0A075B6N4 114 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 A0A087WX48 190 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 USP17L23D6RBM5 183 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 TMEM262E9PQX1 116 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 TRGC1P0CF51 173 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 AMTP48728 403 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 Q0VG73 95 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 RASL11AQ6T310 242 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 CLPSL2Q6UWE3 100 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 RPL39LQ96EH5 51 aaKnown RBP3.43□□□□□ -1.86
CD46-211ENST00000464082 RNF185Q96GF1 192 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 PGLYRP4Q96LB8 373 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 CHCHD5Q9BSY4 110 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 NIT2Q9NQR4 276 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 BIN3Q9NQY0 253 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 URGCP-MRPS24S4R325 110 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 FAT3Q8TDW7 4589 aa3.43□□□□□ -1.86
CD46-211ENST00000464082 IGHV1-24A0A0C4DH33 117 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 XKRY2A2RUG3 117 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 FAM231BA6NCW3 169 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 PANO1I0J062 215 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 GATCO43716 136 aaKnown RBP3.42□□□□□ -1.86
CD46-211ENST00000464082 ANGP03950 147 aaKnown RBP3.42□□□□□ -1.86
CD46-211ENST00000464082 PRSS1P07477 247 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 SMIM17P0DL12 118 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 ELOBQ15370 118 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 MIAQ16674 131 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 TMEM97Q5BJF2 176 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 SCXQ7RTU7 201 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 LINC00269Q8N2A0 174 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 V9GYV3 84 aa3.42□□□□□ -1.86
CD46-211ENST00000464082 TRBV6-5A0A0K0K1A5 114 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 H7C1H1 209 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 INAFM2P0DMQ5 153 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 RPS10P46783 165 aaKnown RBP3.41□□□□□ -1.86
CD46-211ENST00000464082 REG3AQ06141 175 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 FRZBQ92765 325 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 ISOC2Q96AB3 205 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 RMI2Q96E14 147 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 SMIM7Q9BQ49 75 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 TMEM243Q9BU79 118 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 OSTCQ9NRP0 149 aa3.41□□□□□ -1.86
CD46-211ENST00000464082 IGLV10-54A0A075B6I4 117 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 SDHAF1A6NFY7 115 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 ZNF727A8MUV8 499 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 A8MWL6 223 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 TSHBP01222 138 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 CRPP02741 224 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 ESDP10768 282 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 CEBPGP53567 150 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 POLR2KP53803 58 aaKnown RBP3.4□□□□□ -1.87
CD46-211ENST00000464082 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 PKIAP61925 76 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.87
CD46-211ENST00000464082 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 C15orf56Q8N910 161 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 C9orf163Q8N9P6 203 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 NUP35Q8NFH5 326 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 CIRBP-AS1Q8TBR5 109 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 TSKUQ8WUA8 353 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 CHAC1Q9BUX1 264 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 EIF5A2Q9GZV4 153 aaKnown RBP3.4□□□□□ -1.87
CD46-211ENST00000464082 TMEM191AQ9H0A3 160 aa3.4□□□□□ -1.87
CD46-211ENST00000464082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
CD46-211ENST00000464082 A0A1B0GUT8 65 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
CD46-211ENST00000464082 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 RAB4AP20338 218 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 CIRBPQ14011 172 aaKnown RBP3.39□□□□□ -1.87
CD46-211ENST00000464082 COTL1Q14019 142 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 SDIM1Q6ZPB5 146 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 AMN1Q8IY45 258 aa3.39□□□□□ -1.87
CD46-211ENST00000464082 TRAV8-4A0A0B4J246 113 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 NCR2O95944 276 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 FGF6P10767 208 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 HNRNPA3P51991 378 aaKnown RBP3.38□□□□□ -1.87
CD46-211ENST00000464082 CNBPP62633 177 aaKnown RBP3.38□□□□□ -1.87
CD46-211ENST00000464082 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.38□□□□□ -1.87
CD46-211ENST00000464082 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 TMEM242Q9NWH2 141 aa3.38□□□□□ -1.87
CD46-211ENST00000464082 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 TRBV27A0A0K0K1C4 114 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 H7C423 109 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 I3L3M4 83 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 APCSP02743 223 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 TMEM241Q24JQ0 296 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 MRPL51Q4U2R6 128 aaKnown RBP3.37□□□□□ -1.87
CD46-211ENST00000464082 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
CD46-211ENST00000464082 MRPL52Q86TS9 123 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms