RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 MYOM3Q5VTT5 1437 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 ATRQ13535 2644 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 FLGP20930 4061 aaPredicted RBP-0.37□□□□□ -2.47
USP9X-204ENST00000463829 CHD6Q8TD26 2715 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 PKDREJQ9NTG1 2253 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 TRAV13-2A0A0B4J235 113 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 SPAARA0A1B0GVQ0 90 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 Q8IZM0 81 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 SMIM4Q8WVI0 70 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 AQP10Q96PS8 301 aa-0.37□□□□□ -2.47
USP9X-204ENST00000463829 ITPR3Q14573 2671 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 MYH8P13535 1937 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 MYCBP2O75592 4640 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 M0R135 149 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 S100A3P33764 101 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 LAMA3Q16787 3333 aa-0.38□□□□□ -2.47
USP9X-204ENST00000463829 LAMA1P25391 3075 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 GCN1Q92616 2671 aaKnown RBP-0.39□□□□□ -2.47
USP9X-204ENST00000463829 ACACBO00763 2458 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 BPTFQ12830 3046 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 PKD1L1Q8TDX9 2849 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 MRC1P22897 1456 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 GRIN2AQ12879 1464 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 PLCE1Q9P212 2302 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 DNAH7Q8WXX0 4024 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 BCE1O60756 84 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 HIST1H1DP16402 221 aaKnown RBP-0.39□□□□□ -2.47
USP9X-204ENST00000463829 HAMPP81172 84 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 C10orf128Q5T292 105 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 COPS9Q8WXC6 57 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 PDCD10Q9BUL8 212 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 PAIP2BQ9ULR5 123 aaKnown RBP-0.39□□□□□ -2.47
USP9X-204ENST00000463829 SPEF2Q9C093 1822 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
USP9X-204ENST00000463829 ITPR1Q14643 2758 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 PPRC1Q5VV67 1664 aaKnown RBP-0.4□□□□□ -2.47
USP9X-204ENST00000463829 WNK3Q9BYP7 1800 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 TNRC18O15417 2968 aaPredicted RBP-0.4□□□□□ -2.47
USP9X-204ENST00000463829 PRDM2Q13029 1718 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 CTXND1A0A1B0GTU2 59 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 ARPC4P59998 168 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 RBM3P98179 157 aaKnown RBP-0.4□□□□□ -2.47
USP9X-204ENST00000463829 SPAG11BQ08648 103 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 KRTAP19-6Q3LI70 58 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 C12orf73Q69YU5 71 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 SPAG11AQ6PDA7 123 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 LENEPQ9Y5L5 61 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 KDM3BQ7LBC6 1761 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 PRRC2CQ9Y520 2896 aaKnown RBP-0.4□□□□□ -2.47
USP9X-204ENST00000463829 TEX15Q9BXT5 2789 aa-0.4□□□□□ -2.47
USP9X-204ENST00000463829 CUBNO60494 3623 aa-0.41□□□□□ -2.47
USP9X-204ENST00000463829 SPRR2DP22532 72 aa-0.41□□□□□ -2.48
USP9X-204ENST00000463829 SPRR1AP35321 89 aa-0.41□□□□□ -2.48
USP9X-204ENST00000463829 AGPAT4-IT1Q9H0P7 198 aa-0.41□□□□□ -2.48
USP9X-204ENST00000463829 HECTD4Q9Y4D8 3996 aa-0.41□□□□□ -2.48
USP9X-204ENST00000463829 LRP6O75581 1613 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 PKHD1P08F94 4074 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 TTC9CQ8N5M4 171 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 TP53AIP1Q9HCN2 124 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 V9GYH0 126 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 ERCC6L2Q5T890 1561 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 PCNX1Q96RV3 2341 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 MAP1AP78559 2803 aaPredicted RBP-0.42□□□□□ -2.48
USP9X-204ENST00000463829 AKAP13Q12802 2813 aa-0.42□□□□□ -2.48
USP9X-204ENST00000463829 PLECQ15149 4684 aaKnown RBP-0.43□□□□□ -2.48
USP9X-204ENST00000463829 PRKDCP78527 4128 aaKnown RBP-0.43□□□□□ -2.48
USP9X-204ENST00000463829 TACC2O95359 2948 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 PIEZO2Q9H5I5 2752 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 MUC17Q685J3 4493 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 PPIP5K1Q6PFW1 1433 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 DCDP81605 110 aaKnown RBP-0.43□□□□□ -2.48
USP9X-204ENST00000463829 Q8N8P6 123 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 LAMC1P11047 1609 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 CFTRP13569 1480 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 DNAH2Q9P225 4427 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 PLXNB2O15031 1838 aa-0.43□□□□□ -2.48
USP9X-204ENST00000463829 LRRC37A2A6NM11 1700 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 C10orf71Q711Q0 1435 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 MTORP42345 2549 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 COX17Q14061 63 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 Q6AWC8 147 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 SNRNP25Q9BV90 132 aaKnown RBP-0.44□□□□□ -2.48
USP9X-204ENST00000463829 RERGLQ9H628 205 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 SERP1Q9Y6X1 66 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 PKD1L2Q7Z442 2459 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 APC2O95996 2303 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 MYO9AB2RTY4 2548 aa-0.44□□□□□ -2.48
USP9X-204ENST00000463829 PKD1P98161 4303 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 VPS13BQ7Z7G8 4022 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 DNAH1Q9P2D7 4330 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 DYNC1H1Q14204 4646 aaKnown RBP-0.45□□□□□ -2.48
USP9X-204ENST00000463829 PRM1P04553 51 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 TMEM170BQ5T4T1 132 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 LSM10Q969L4 123 aaKnown RBP-0.45□□□□□ -2.48
USP9X-204ENST00000463829 AMELXQ99217 191 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 ARAP2Q8WZ64 1704 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 CFAP46Q8IYW2 2715 aa-0.45□□□□□ -2.48
USP9X-204ENST00000463829 NBEAQ8NFP9 2946 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms