RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 SAMD5Q5TGI4 173 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 UFSP1Q6NVU6 142 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 HIST1H4GQ99525 98 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 SPENQ96T58 3664 aaKnown RBP3.23□□□□□ -1.89
RGPD6-207ENST00000463822 TRBV6-8A0A0A6YYG3 113 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 Q6ZUT4 128 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 TOMM7Q9P0U1 55 aa3.23□□□□□ -1.89
RGPD6-207ENST00000463822 MRPS16Q9Y3D3 137 aaKnown RBP3.23□□□□□ -1.89
RGPD6-207ENST00000463822 A8MZ25 164 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 NPSP0C0P6 89 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 SS18Q15532 418 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 BSNQ9UPA5 3926 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 Q8NAQ8 132 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 H7C423 109 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 HSD52Q0P140 79 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 MPV17L2Q567V2 206 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 Q9UF83 564 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 DEFB131BA0A096LNP1 70 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 J3QQQ9 107 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 TTTY13Q9BZ97 58 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 CELA1Q9UNI1 258 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
RGPD6-207ENST00000463822 PRSS2P07478 247 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 MRPL52Q86TS9 123 aaKnown RBP3.22□□□□□ -1.89
RGPD6-207ENST00000463822 PCP2Q8IVA1 136 aa3.22□□□□□ -1.89
RGPD6-207ENST00000463822 A0A0J9YWU9 116 aa3.21□□□□□ -1.89
RGPD6-207ENST00000463822 CIRBPQ14011 172 aaKnown RBP3.21□□□□□ -1.89
RGPD6-207ENST00000463822 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.89
RGPD6-207ENST00000463822 TMEM238LA0A1B0GVL6 79 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 A6NJY4 79 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 MDFIQ99750 246 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 AGRNO00468 2067 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 CFAP161Q6P656 301 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 TRAV10A0A0B4J240 114 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 MYMXA0A1B0GTQ4 84 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 E9PLD3 99 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
RGPD6-207ENST00000463822 MRPS36P82909 103 aaKnown RBP3.21□□□□□ -1.9
RGPD6-207ENST00000463822 Q6ZTC4 211 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 C11orf68Q9H3H3 251 aaKnown RBP3.21□□□□□ -1.9
RGPD6-207ENST00000463822 NDUFA12Q9UI09 145 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 TMEM238C9JI98 176 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 EREGO14944 169 aa3.21□□□□□ -1.9
RGPD6-207ENST00000463822 MALP21145 153 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 RBX1P62877 108 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 SIVA1O15304 175 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 SPINK8P0C7L1 97 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 NANOS2P60321 138 aaKnown RBP3.2□□□□□ -1.9
RGPD6-207ENST00000463822 C12orf74Q32Q52 190 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 KPRPQ5T749 579 aaPredicted RBP3.2□□□□□ -1.9
RGPD6-207ENST00000463822 NFE4Q86UQ8 179 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 DLEU1O43261 78 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 Q1RN00 199 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 SBSPONQ8IVN8 264 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 UBE2DNLQ8IWF7 75 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 SNHG12Q9BXW3 62 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 IGKV2D-26A0A0A0MRZ7 120 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 TINCRA0A1B0GVN0 87 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 LEPROTO15243 131 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 LINC00694P0DN24 101 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 VAMP3Q15836 100 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 CLPSL2Q6UWE3 100 aa3.2□□□□□ -1.9
RGPD6-207ENST00000463822 CCL18P55774 89 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 C6orf226Q5I0X4 101 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 NTM-AS1Q6ZSK4 140 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 UBE2WQ96B02 151 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 AMELXQ99217 191 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 CDKN2A-AS1Q9UH64 79 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 CSDC2Q9Y534 153 aaKnown RBP3.19□□□□□ -1.9
RGPD6-207ENST00000463822 K7EIL1 84 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 XCL1P47992 114 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 LELP1Q5T871 98 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 CDC42SE2Q9NRR3 84 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 TIRAPP58753 221 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 TP73-AS1Q9UF72 201 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 CCL25O15444 150 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 NHP2Q9NX24 153 aaKnown RBP3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGLV4-69A0A075B6H9 119 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGLL5B9A064 214 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 TAL2Q16559 108 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 RAB37Q96AX2 223 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 KLK12Q9UKR0 248 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 TENM1Q9UKZ4 2725 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGHV1-58A0A0C4DH39 117 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 APOMO95445 188 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 C5orf38Q86SI9 138 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 ZNF625Q96I27 306 aaPredicted RBP3.19□□□□□ -1.9
RGPD6-207ENST00000463822 HIGD1BQ9P298 99 aa3.19□□□□□ -1.9
RGPD6-207ENST00000463822 IGLV10-54A0A075B6I4 117 aa3.18□□□□□ -1.9
RGPD6-207ENST00000463822 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms