RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 J3QQQ9 107 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 CIDEAO60543 219 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 VAMP3Q15836 100 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 KIR2DL5BQ8NHK3 375 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
MSH5-211ENST00000463144 TIMM21Q9BVV7 248 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 A0A0J9YY99 117 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 LEPROTO15243 131 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 DEFB130BP0DP73 79 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 DEFB130AP0DP74 79 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 NBEAL2Q6ZNJ1 2754 aa7.18□□□□□ -1.26
MSH5-211ENST00000463144 TINCRA0A1B0GVN0 87 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 K7ERJ3 54 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 WIPF1O43516 503 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 UBE2D1P51668 147 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 H3BUT2 72 aa7.17□□□□□ -1.26
MSH5-211ENST00000463144 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
MSH5-211ENST00000463144 DEFB135Q30KP9 77 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 KRTAP24-1Q3LI83 254 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 GTSF1LQ9H1H1 148 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 TRAV8-3A0A0A6YYJ7 113 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 LGALS3P17931 250 aaKnown RBP7.16□□□□□ -1.26
MSH5-211ENST00000463144 DGAT2L7PQ6IED9 249 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
MSH5-211ENST00000463144 CSDC2Q9Y534 153 aaKnown RBP7.16□□□□□ -1.26
MSH5-211ENST00000463144 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
MSH5-211ENST00000463144 C12orf74Q32Q52 190 aa7.15□□□□□ -1.26
MSH5-211ENST00000463144 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.27
MSH5-211ENST00000463144 COX6A2Q02221 97 aa7.15□□□□□ -1.27
MSH5-211ENST00000463144 A0A1B0GWB2 263 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 A8MZ25 164 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 DEFB4AO15263 64 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 APOC4P55056 127 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 TMEM243Q9BU79 118 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 CDKN2A-AS1Q9UH64 79 aa7.14□□□□□ -1.27
MSH5-211ENST00000463144 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 TIRAPP58753 221 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
MSH5-211ENST00000463144 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 A0A1W2PPM0 123 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 IGHV4-30-4P0DP06 118 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
MSH5-211ENST00000463144 GEMIN7Q9H840 131 aaKnown RBP7.13□□□□□ -1.27
MSH5-211ENST00000463144 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
MSH5-211ENST00000463144 IGHV4-28A0A0C4DH34 117 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 IGHV3-30P01768 117 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 IGHV3-30-5P0DP03 117 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 OXLD1Q5BKU9 147 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 SAMD5Q5TGI4 173 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 TRBV6-8A0A0A6YYG3 113 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 LYRM9A8MSI8 78 aa7.12□□□□□ -1.27
MSH5-211ENST00000463144 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 IGLL5B9A064 214 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 GAGE6Q13070 117 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 Q8NAQ8 132 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 TRAV13-1A0A0B4J241 112 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 H7C423 109 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 UBE2L6O14933 153 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 GYPEP15421 78 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
MSH5-211ENST00000463144 K7EP34 96 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 RNF183Q96D59 192 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 LITAFQ99732 161 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 CELA1Q9UNI1 258 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 HERVK_113P63121 156 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
MSH5-211ENST00000463144 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
MSH5-211ENST00000463144 ZFAND6Q6FIF0 208 aa7.09□□□□□ -1.27
MSH5-211ENST00000463144 ATP6V0E2Q8NHE4 81 aa7.09□□□□□ -1.27
MSH5-211ENST00000463144 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
MSH5-211ENST00000463144 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 FABP2P12104 132 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 MIFP14174 115 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 SPCS1Q9Y6A9 102 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 TMEM238LA0A1B0GVL6 79 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 A6NJY4 79 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 F5H768 121 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 GTF2H5Q6ZYL4 71 aa7.08□□□□□ -1.28
MSH5-211ENST00000463144 A0A096LPF7 62 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms