RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
HLA-DPA1-245ENST00000463066 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.65
HLA-DPA1-245ENST00000463066 PGPEP1Q9NXJ5 209 aa10.96□□□□□ -0.65
HLA-DPA1-245ENST00000463066 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.65
HLA-DPA1-245ENST00000463066 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
HLA-DPA1-245ENST00000463066 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.95□□□□□ -0.66
HLA-DPA1-245ENST00000463066 PRSS47A8MTI9 375 aa10.95□□□□□ -0.66
HLA-DPA1-245ENST00000463066 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
HLA-DPA1-245ENST00000463066 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
HLA-DPA1-245ENST00000463066 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
HLA-DPA1-245ENST00000463066 GAGE12HA6NDE8 117 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 USP17L23D6RBM5 183 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 KRTAP10-1P60331 282 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 Q6ZUT4 128 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 Q8N8P6 123 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
HLA-DPA1-245ENST00000463066 HERC2O95714 4834 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 TRAV8-4A0A0B4J246 113 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 FABP9Q0Z7S8 132 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 DGAT2L7PQ6IED9 249 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 ZNF664Q8N3J9 261 aa10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 ALKBH7Q9BT30 221 aaPredicted RBP10.93□□□□□ -0.66
HLA-DPA1-245ENST00000463066 RAB5AP20339 215 aa10.92□□□□□ -0.66
HLA-DPA1-245ENST00000463066 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
HLA-DPA1-245ENST00000463066 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
HLA-DPA1-245ENST00000463066 RYR1P21817 5038 aa10.92□□□□□ -0.66
HLA-DPA1-245ENST00000463066 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
HLA-DPA1-245ENST00000463066 COX19Q49B96 90 aa10.91□□□□□ -0.66
HLA-DPA1-245ENST00000463066 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
HLA-DPA1-245ENST00000463066 CDPF1Q6NVV7 123 aa10.91□□□□□ -0.66
HLA-DPA1-245ENST00000463066 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
HLA-DPA1-245ENST00000463066 MT-ND6P03923 174 aa10.9□□□□□ -0.66
HLA-DPA1-245ENST00000463066 NTN5Q8WTR8 489 aaPredicted RBP10.9□□□□□ -0.66
HLA-DPA1-245ENST00000463066 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 CCL25O15444 150 aa10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 PRSS1P07477 247 aa10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 XCL1P47992 114 aa10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 TMEM18Q96B42 140 aa10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
HLA-DPA1-245ENST00000463066 GCSHP23434 173 aa10.88□□□□□ -0.67
HLA-DPA1-245ENST00000463066 FOXI1Q12951 378 aa10.88□□□□□ -0.67
HLA-DPA1-245ENST00000463066 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
HLA-DPA1-245ENST00000463066 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
HLA-DPA1-245ENST00000463066 TRAV13-1A0A0B4J241 112 aa10.87□□□□□ -0.67
HLA-DPA1-245ENST00000463066 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 ZC2HC1BQ5TFG8 222 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 C15orf56Q8N910 161 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 KRTAP17-1Q9BYP8 105 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
HLA-DPA1-245ENST00000463066 HAMPP81172 84 aa10.85□□□□□ -0.67
HLA-DPA1-245ENST00000463066 SS18Q15532 418 aa10.85□□□□□ -0.67
HLA-DPA1-245ENST00000463066 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
HLA-DPA1-245ENST00000463066 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
HLA-DPA1-245ENST00000463066 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
HLA-DPA1-245ENST00000463066 HIGD2BQ4VC39 106 aa10.84□□□□□ -0.67
HLA-DPA1-245ENST00000463066 C14orf177Q52M58 125 aa10.84□□□□□ -0.67
HLA-DPA1-245ENST00000463066 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
HLA-DPA1-245ENST00000463066 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
HLA-DPA1-245ENST00000463066 FAM30AQ9NZY2 134 aa10.83□□□□□ -0.68
HLA-DPA1-245ENST00000463066 HSPG2P98160 4391 aa10.83□□□□□ -0.68
HLA-DPA1-245ENST00000463066 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
HLA-DPA1-245ENST00000463066 hDV102S1A0JD36 115 aa10.82□□□□□ -0.68
HLA-DPA1-245ENST00000463066 SLPIP03973 132 aa10.82□□□□□ -0.68
HLA-DPA1-245ENST00000463066 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
HLA-DPA1-245ENST00000463066 PYGO1Q9Y3Y4 419 aa10.82□□□□□ -0.68
HLA-DPA1-245ENST00000463066 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 IFITM10A6NMD0 228 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 C1orf196B1AJZ1 125 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 K7EMI3 77 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 SCO1O75880 301 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 XGP55808 180 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 CD164L2Q6UWJ8 174 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
HLA-DPA1-245ENST00000463066 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
HLA-DPA1-245ENST00000463066 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
HLA-DPA1-245ENST00000463066 LINC00526Q96FQ7 95 aa10.8□□□□□ -0.68
HLA-DPA1-245ENST00000463066 TOMM6Q96B49 74 aa10.79□□□□□ -0.68
HLA-DPA1-245ENST00000463066 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
HLA-DPA1-245ENST00000463066 CFAP161Q6P656 301 aa10.78□□□□□ -0.68
HLA-DPA1-245ENST00000463066 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
HLA-DPA1-245ENST00000463066 COLCA2A8K830 154 aa10.77□□□□□ -0.69
HLA-DPA1-245ENST00000463066 COX7A2LO14548 114 aa10.77□□□□□ -0.69
HLA-DPA1-245ENST00000463066 A0A096LNJ9 63 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 IGHV1-58A0A0C4DH39 117 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 COX6A2Q02221 97 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 LINC00242Q5T6M2 205 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 AMELXQ99217 191 aa10.76□□□□□ -0.69
HLA-DPA1-245ENST00000463066 TRGC2P03986 189 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms