RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 C18orf32Q8TCD1 76 aa12.98□□□□□ -0.33
HLA-F-222ENST00000462777 SMIM17P0DL12 118 aa12.97□□□□□ -0.33
HLA-F-222ENST00000462777 ESDP10768 282 aa12.97□□□□□ -0.33
HLA-F-222ENST00000462777 PKIAP61925 76 aa12.97□□□□□ -0.33
HLA-F-222ENST00000462777 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
HLA-F-222ENST00000462777 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.33
HLA-F-222ENST00000462777 LOC105371267A0A1B0GV96 52 aa12.96□□□□□ -0.33
HLA-F-222ENST00000462777 PPP1R17O96001 155 aa12.96□□□□□ -0.33
HLA-F-222ENST00000462777 CKS2P33552 79 aa12.96□□□□□ -0.33
HLA-F-222ENST00000462777 KRTAP10-4P60372 401 aaPredicted RBP12.96□□□□□ -0.33
HLA-F-222ENST00000462777 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
HLA-F-222ENST00000462777 ANGP03950 147 aaKnown RBP12.95□□□□□ -0.34
HLA-F-222ENST00000462777 SSTP61278 116 aa12.95□□□□□ -0.34
HLA-F-222ENST00000462777 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
HLA-F-222ENST00000462777 D6R8Y8 96 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
HLA-F-222ENST00000462777 ZNF56Q15929 161 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 ENHOQ6UWT2 76 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 HIST3H2BBQ8N257 126 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 CHCHD5Q9BSY4 110 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
HLA-F-222ENST00000462777 S100A2P29034 98 aa12.93□□□□□ -0.34
HLA-F-222ENST00000462777 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
HLA-F-222ENST00000462777 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
HLA-F-222ENST00000462777 MIAQ16674 131 aa12.92□□□□□ -0.34
HLA-F-222ENST00000462777 TMEM97Q5BJF2 176 aa12.92□□□□□ -0.34
HLA-F-222ENST00000462777 DGAT2L7PQ6IED9 249 aa12.92□□□□□ -0.34
HLA-F-222ENST00000462777 CHCHD1Q96BP2 118 aaKnown RBP12.92□□□□□ -0.34
HLA-F-222ENST00000462777 USP17L23D6RBM5 183 aa12.91□□□□□ -0.34
HLA-F-222ENST00000462777 MPV17L2Q567V2 206 aa12.91□□□□□ -0.34
HLA-F-222ENST00000462777 NEXN-AS1Q8NBZ9 246 aa12.91□□□□□ -0.34
HLA-F-222ENST00000462777 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
HLA-F-222ENST00000462777 F5H697 171 aa12.9□□□□□ -0.34
HLA-F-222ENST00000462777 SERF1AO75920 110 aa12.9□□□□□ -0.34
HLA-F-222ENST00000462777 TMEM18Q96B42 140 aa12.9□□□□□ -0.34
HLA-F-222ENST00000462777 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
HLA-F-222ENST00000462777 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
HLA-F-222ENST00000462777 PMCHP20382 165 aa12.89□□□□□ -0.35
HLA-F-222ENST00000462777 H7C1H1 209 aa12.88□□□□□ -0.35
HLA-F-222ENST00000462777 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
HLA-F-222ENST00000462777 MGPP08493 103 aa12.88□□□□□ -0.35
HLA-F-222ENST00000462777 C20orf78Q9BR46 151 aa12.88□□□□□ -0.35
HLA-F-222ENST00000462777 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
HLA-F-222ENST00000462777 NPYP01303 97 aa12.87□□□□□ -0.35
HLA-F-222ENST00000462777 PRSS1P07477 247 aa12.87□□□□□ -0.35
HLA-F-222ENST00000462777 LINC00310P59036 64 aa12.87□□□□□ -0.35
HLA-F-222ENST00000462777 RPL32P62910 135 aaKnown RBP12.87□□□□□ -0.35
HLA-F-222ENST00000462777 IQCJQ1A5X6 159 aa12.87□□□□□ -0.35
HLA-F-222ENST00000462777 NRACQ8N912 160 aa12.87□□□□□ -0.35
HLA-F-222ENST00000462777 HSBP1O75506 76 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 NCR2O95944 276 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 LINC00614P0C842 121 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 FA2HQ7L5A8 372 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 C9orf163Q8N9P6 203 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
HLA-F-222ENST00000462777 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
HLA-F-222ENST00000462777 K7EMI3 77 aa12.85□□□□□ -0.35
HLA-F-222ENST00000462777 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
HLA-F-222ENST00000462777 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
HLA-F-222ENST00000462777 AP5S1Q9NUS5 200 aa12.85□□□□□ -0.35
HLA-F-222ENST00000462777 TRBV25-1A0A075B6N4 114 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 TRBV6-5A0A0K0K1A5 114 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 LINC01546A6NGU7 62 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 GAGE6Q13070 117 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 SUMO4Q6EEV6 95 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 PRR34Q9NV39 138 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 HMCN2Q8NDA2 5059 aa12.84□□□□□ -0.35
HLA-F-222ENST00000462777 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
HLA-F-222ENST00000462777 RBX1P62877 108 aa12.83□□□□□ -0.36
HLA-F-222ENST00000462777 PDZD11Q5EBL8 140 aa12.83□□□□□ -0.36
HLA-F-222ENST00000462777 CLPSL2Q6UWE3 100 aa12.83□□□□□ -0.36
HLA-F-222ENST00000462777 Q8N8P6 123 aa12.83□□□□□ -0.36
HLA-F-222ENST00000462777 FAT3Q8TDW7 4589 aa12.82□□□□□ -0.36
HLA-F-222ENST00000462777 FABP4P15090 132 aa12.82□□□□□ -0.36
HLA-F-222ENST00000462777 AMTP48728 403 aa12.82□□□□□ -0.36
HLA-F-222ENST00000462777 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
HLA-F-222ENST00000462777 NTM-AS1Q6ZSK4 140 aa12.82□□□□□ -0.36
HLA-F-222ENST00000462777 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
HLA-F-222ENST00000462777 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
HLA-F-222ENST00000462777 M0QY20 66 aa12.81□□□□□ -0.36
HLA-F-222ENST00000462777 NUPR1O60356 82 aa12.81□□□□□ -0.36
HLA-F-222ENST00000462777 DPH3Q96FX2 82 aa12.81□□□□□ -0.36
HLA-F-222ENST00000462777 SMIM2Q9BVW6 85 aa12.81□□□□□ -0.36
HLA-F-222ENST00000462777 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.81□□□□□ -0.36
HLA-F-222ENST00000462777 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
HLA-F-222ENST00000462777 TCAPO15273 167 aa12.8□□□□□ -0.36
HLA-F-222ENST00000462777 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
HLA-F-222ENST00000462777 AKR1D1P51857 326 aa12.8□□□□□ -0.36
HLA-F-222ENST00000462777 ST20Q9HBF5 79 aa12.8□□□□□ -0.36
HLA-F-222ENST00000462777 NIT2Q9NQR4 276 aa12.8□□□□□ -0.36
HLA-F-222ENST00000462777 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
HLA-F-222ENST00000462777 SDIM1Q6ZPB5 146 aa12.79□□□□□ -0.36
HLA-F-222ENST00000462777 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
HLA-F-222ENST00000462777 LOC389332A0A1B0GUA5 103 aa12.78□□□□□ -0.36
HLA-F-222ENST00000462777 GAS8-AS1O95177 125 aa12.78□□□□□ -0.36
HLA-F-222ENST00000462777 REG3AQ06141 175 aa12.78□□□□□ -0.36
HLA-F-222ENST00000462777 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-222ENST00000462777 hDV102S1A0JD36 115 aa12.77□□□□□ -0.37
HLA-F-222ENST00000462777 LINC01549A6NIU2 74 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms