RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 BRWD1Q9NSI6 2320 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 SIP14410 1827 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 MYMXA0A1B0GTQ4 84 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 PSENENQ9NZ42 101 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 R4GMQ9 66 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 ARL2-SNX15V9GYD0 113 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 MYOM1P52179 1685 aa3.26□□□□□ -1.89
SGCE-209ENST00000462731 SHANK1Q9Y566 2161 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 M0R2N4 97 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 DNAL4O96015 105 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 GNGT1P63211 74 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 IGFL1Q6UW32 110 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 LINC00322Q6ZN03 302 aaPredicted RBP3.25□□□□□ -1.89
SGCE-209ENST00000462731 MADDQ8WXG6 1647 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 CEP350Q5VT06 3117 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 RGPD8O14715 1765 aaPredicted RBP3.25□□□□□ -1.89
SGCE-209ENST00000462731 RGPD2P0DJD1 1756 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 RGPD5Q99666 1765 aa3.25□□□□□ -1.89
SGCE-209ENST00000462731 CLASP1Q7Z460 1538 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 NBDYA0A0U1RRE5 68 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 FAM223BA6NKX1 122 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 GAS8-AS1O95177 125 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 ESPL1Q14674 2120 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 DLG5Q8TDM6 1919 aa3.24□□□□□ -1.89
SGCE-209ENST00000462731 PI4KAP42356 2102 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 DLEC1Q9Y238 1755 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
SGCE-209ENST00000462731 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
SGCE-209ENST00000462731 IGLV3-19P01714 112 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 CCL18P55774 89 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 RPL37AP61513 92 aaKnown RBP3.23□□□□□ -1.89
SGCE-209ENST00000462731 PLGLAQ15195 96 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 COA5Q86WW8 74 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 TXNDC17Q9BRA2 123 aa3.23□□□□□ -1.89
SGCE-209ENST00000462731 MRC1P22897 1456 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 RTTNQ86VV8 2226 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 A0A1B0GWA3 101 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 CEBPZOSA8MTT3 80 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 F8VRH5 84 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 ARMS2P0C7Q2 107 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 DOCK11Q5JSL3 2073 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 PRRC2AP48634 2157 aaKnown RBP3.22□□□□□ -1.89
SGCE-209ENST00000462731 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SGCE-209ENST00000462731 ADGRB2O60241 1585 aa3.21□□□□□ -1.89
SGCE-209ENST00000462731 KDM3BQ7LBC6 1761 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 TRBV6-5A0A0K0K1A5 114 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 FXYD3Q14802 87 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 ZNF563Q8TA94 476 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 LINC01558Q9Y6Z2 57 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 V9GYV3 84 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 PRRC2BQ5JSZ5 2229 aaKnown RBP3.21□□□□□ -1.9
SGCE-209ENST00000462731 SHROOM3Q8TF72 1996 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 ALPK2Q86TB3 2170 aa3.21□□□□□ -1.9
SGCE-209ENST00000462731 HCP5Q6MZN7 132 aa3.2□□□□□ -1.9
SGCE-209ENST00000462731 ARHGEF5Q12774 1597 aa3.2□□□□□ -1.9
SGCE-209ENST00000462731 ABCA4P78363 2273 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 AFDNP55196 1824 aaKnown RBP3.19□□□□□ -1.9
SGCE-209ENST00000462731 LEPROTL1O95214 131 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 C6orf201Q7Z4U5 140 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 KIF21BO75037 1637 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 TARBP1Q13395 1621 aaKnown RBP3.19□□□□□ -1.9
SGCE-209ENST00000462731 PREX2Q70Z35 1606 aa3.19□□□□□ -1.9
SGCE-209ENST00000462731 A0A087WTM6 91 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 A0A087WXM4 84 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 IGKV2-29A2NJV5 120 aaPredicted RBP3.18□□□□□ -1.9
SGCE-209ENST00000462731 SPTBP11277 2137 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 FXYD4P59646 89 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 Q6JHZ5 121 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 WFDC6Q9BQY6 131 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 LMTK2Q8IWU2 1503 aa3.18□□□□□ -1.9
SGCE-209ENST00000462731 COL5A3P25940 1745 aaPredicted RBP3.17□□□□□ -1.9
SGCE-209ENST00000462731 D6R8Y8 96 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 M0R135 149 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 UQCR11O14957 56 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 SFTA3P0C7M3 94 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 COX8AP10176 69 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 IL9P15248 144 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 MUSTN1Q8IVN3 82 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 ZNF625Q96I27 306 aaPredicted RBP3.17□□□□□ -1.9
SGCE-209ENST00000462731 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
SGCE-209ENST00000462731 FXYD1O00168 92 aa3.16□□□□□ -1.9
SGCE-209ENST00000462731 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
SGCE-209ENST00000462731 BAGE2Q86Y30 109 aa3.16□□□□□ -1.9
SGCE-209ENST00000462731 BTAF1O14981 1849 aa3.16□□□□□ -1.9
SGCE-209ENST00000462731 RGPD1P0DJD0 1748 aa3.16□□□□□ -1.9
SGCE-209ENST00000462731 RREB1Q92766 1687 aa3.15□□□□□ -1.9
SGCE-209ENST00000462731 GCHFRP30047 84 aa3.15□□□□□ -1.91
SGCE-209ENST00000462731 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
SGCE-209ENST00000462731 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
SGCE-209ENST00000462731 FREM1Q5H8C1 2179 aa3.15□□□□□ -1.91
SGCE-209ENST00000462731 MDC1Q14676 2089 aaKnown RBP3.15□□□□□ -1.91
SGCE-209ENST00000462731 FN1P02751 2386 aaKnown RBP3.15□□□□□ -1.91
SGCE-209ENST00000462731 ASXL1Q8IXJ9 1541 aa3.14□□□□□ -1.91
SGCE-209ENST00000462731 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
SGCE-209ENST00000462731 BAGE3Q86Y29 109 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 296 ms