RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TP53RKQ96S44 253 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 PRRT1Q99946 306 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 PDCD10Q9BUL8 212 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 TMEM147Q9BVK8 224 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 NAA60Q9H7X0 242 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 ENY2Q9NPA8 101 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 FKBP11Q9NYL4 201 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 V9GYH0 126 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 DNAH7Q8WXX0 4024 aa1.4□□□□□ -2.19
CLK1-206ENST00000461326 TRBV7-1A0A0A6YYK4 115 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 NAP1L6A6NFF2 107 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 OR2T8A6NH00 312 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 FAM223BA6NKX1 122 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 CEBPZOSA8MTT3 80 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 CYB5BO43169 146 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 LYRM1O43325 122 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 ATG12O94817 140 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 TCL1BO95988 128 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 IL7P13232 177 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 HIST1H1BP16401 226 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 SNCAP37840 140 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 ETV6P41212 452 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 RPS20P60866 119 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 HSPE1P61604 102 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 SUPT4H1P63272 117 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 PRCDQ00LT1 54 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 RUNX1Q01196 453 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 ZNF345Q14585 488 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 SURF2Q15527 256 aaPredicted RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 Q56UQ5 140 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 DPPA3Q6W0C5 159 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 MIR17HGQ75NE6 70 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 FAM223AQ8IWN6 122 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 MYOZ3Q8TDC0 251 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 DYNLRB2Q8TF09 96 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 S100ZQ8WXG8 99 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 LSM10Q969L4 123 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 GPR146Q96CH1 333 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 C2orf50Q96LR7 162 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 OR4C12Q96R67 309 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 TSC22D3Q99576 134 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 C11orf68Q9H3H3 251 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 NDUFA4L2Q9NRX3 87 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 TMEM14BQ9NUH8 114 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 PRNDQ9UKY0 176 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 PAIP2BQ9ULR5 123 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
CLK1-206ENST00000461326 LYSTQ99698 3801 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 WNK1Q9H4A3 2382 aa1.39□□□□□ -2.19
CLK1-206ENST00000461326 IGKV3-7A0A075B6H7 116 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 DUXBA0A1W2PPF3 345 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 C9orf170A2RU37 121 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 K7EIL1 84 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 K7EIM0 57 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 PDE6DO43924 150 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 SSSCA1O60232 199 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 GNG7O60262 68 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 GGCTO75223 188 aaKnown RBP1.38□□□□□ -2.19
CLK1-206ENST00000461326 NDUFB6O95139 128 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 SFT2D2O95562 160 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 IFNA21P01568 189 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 CRPP02741 224 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 OR4E1P0C645 316 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 IAPPP10997 89 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 INSL3P51460 131 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 ZNF846Q147U1 533 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 SMCO1Q147U7 214 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 TMEM128Q5BJH2 165 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 LYG2Q86SG7 212 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 WFDC9Q8NEX5 89 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 SLC25A21Q9BQT8 299 aaPredicted RBP1.38□□□□□ -2.19
CLK1-206ENST00000461326 CCDC32Q9BV29 185 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 BATF3Q9NR55 127 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 SLC39A9Q9NUM3 307 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 MED9Q9NWA0 146 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 GSKIPQ9P0R6 139 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
CLK1-206ENST00000461326 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 TRAV14DV4A0A0A6YYC5 116 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 PIGBOS1A0A0B4J2F0 54 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 TRBV6-5A0A0K0K1A5 114 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 FAM236DA0A1B0GTK5 79 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 I3L2K1 104 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 CORTO00230 105 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 NDUFA4O00483 81 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 SIX6O95475 246 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 IGLV1-51P01701 117 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 IFNA4P05014 189 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 FAM236CP0DP71 79 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 SLC25A4P12235 298 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 CBLN1P23435 193 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 S100A4P26447 101 aaKnown RBP1.37□□□□□ -2.19
CLK1-206ENST00000461326 DEFA1P59665 94 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 DEFA3P59666 94 aa1.37□□□□□ -2.19
CLK1-206ENST00000461326 S100A10P60903 97 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms